publipha
Bayesian Meta-Analysis with Publications Bias and P-Hacking
v0.1.2
·
Apr 4, 2023
·
GPL-3
Description
Tools for Bayesian estimation of meta-analysis models that account for publications bias or p-hacking. For publication bias, this package implements a variant of the p-value based selection model of Hedges (1992) <doi:10.1214/ss/1177011364> with discrete selection probabilities. It also implements the mixture of truncated normals model for p-hacking described in Moss and De Bin (2019) <arXiv:1911.12445>.
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CRAN Check Status
14
NOTE
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | NOTE |
| r-devel-linux-x86_64-fedora-gcc | NOTE |
| r-devel-macos-arm64 | NOTE |
| r-devel-windows-x86_64 | NOTE |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | NOTE |
| r-patched-linux-x86_64 | NOTE |
| r-release-linux-x86_64 | NOTE |
| r-release-macos-arm64 | NOTE |
| r-release-macos-x86_64 | NOTE |
| r-release-windows-x86_64 | NOTE |
Check details (20 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Jonas Moss <jonas.gjertsen@gmail.com>’ The Description field contains <arXiv:1911.12445>. Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE
r-devel-linux-x86_64-debian-clang
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Jonas Moss <jonas.gjertsen@gmail.com>’ The Description field contains <arXiv:1911.12445>. Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE
r-devel-linux-x86_64-debian-gcc
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-devel-linux-x86_64-fedora-clang
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-devel-linux-x86_64-fedora-gcc
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-devel-macos-arm64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-devel-windows-x86_64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-oldrel-macos-arm64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-oldrel-macos-arm64
for GNU extensions in Makefiles
GNU make is a SystemRequirements.
NOTE
r-oldrel-macos-arm64
installed package size
installed size is 61.2Mb
sub-directories of 1Mb or more:
libs 60.7Mb
NOTE
r-oldrel-macos-x86_64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-oldrel-macos-x86_64
for GNU extensions in Makefiles
GNU make is a SystemRequirements.
NOTE
r-oldrel-macos-x86_64
installed package size
installed size is 62.1Mb
sub-directories of 1Mb or more:
libs 61.7Mb
NOTE
r-oldrel-windows-x86_64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-patched-linux-x86_64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-release-linux-x86_64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-release-macos-arm64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-release-macos-x86_64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-release-windows-x86_64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
Check History
NOTE 0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Jonas Moss <jonas.gjertsen@gmail.com>’ The Description field contains <arXiv:1911.12445>. Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Jonas Moss <jonas.gjertsen@gmail.com>’ The Description field contains <arXiv:1911.12445>. Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE
r-devel-linux-x86_64-fedora-clang
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-devel-linux-x86_64-fedora-gcc
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-devel-macos-arm64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-devel-windows-x86_64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-patched-linux-x86_64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-release-linux-x86_64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-release-macos-arm64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-release-macos-x86_64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-release-windows-x86_64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
NOTE
r-oldrel-macos-arm64
installed package size
installed size is 61.2Mb
sub-directories of 1Mb or more:
libs 60.7Mb
NOTE
r-oldrel-macos-x86_64
installed package size
installed size is 62.1Mb
sub-directories of 1Mb or more:
libs 61.7Mb
NOTE
r-oldrel-windows-x86_64
Rd files
checkRd: (-1) ma.Rd:62: Lost braces
62 | \item{yi}{Numeric vector of length code{k} with observed effect size
| ^
checkRd: (-1) ma.Rd:65: Lost braces
65 | \item{vi}{Numeric vector of length code{k} with sampling variances.}
| ^
Dependency Network
Version History
new
0.1.2
Mar 9, 2026