protViz

Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics

v0.7.9 · Dec 12, 2023 · GPL-3

Description

Helps with quality checks, visualizations and analysis of mass spectrometry data, coming from proteomics experiments. The package is developed, tested and used at the Functional Genomics Center Zurich <https://fgcz.ch>. We use this package mainly for prototyping, teaching, and having fun with proteomics data. But it can also be used to do data analysis for small scale data sets.

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CRAN Check Status

4 NOTE

10 OK

Show all 14 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	NOTE	123.3s
r-devel-linux-x86_64-debian-gcc	NOTE	91.3s
r-devel-linux-x86_64-fedora-clang	OK	191.8s
r-devel-linux-x86_64-fedora-gcc	OK	217.6s
r-devel-macos-arm64	OK	35s
r-devel-windows-x86_64	OK	254s
r-oldrel-macos-arm64	NOTE
r-oldrel-macos-x86_64	NOTE	144s
r-oldrel-windows-x86_64	OK	246s
r-patched-linux-x86_64	OK	116.7s
r-release-linux-x86_64	OK	115s
r-release-macos-arm64	OK
r-release-macos-x86_64	OK	162s
r-release-windows-x86_64	OK	270s

Check details (14 non-OK)

NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Christian Panse <cp@fgcz.ethz.ch>’

Found the following (possibly) invalid file URI:
  URI: {cp,jg}@fgcz.ethz.ch
    From: inst/doc/poster.pdf

NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Christian Panse <cp@fgcz.ethz.ch>’

Found the following (possibly) invalid file URI:
  URI: {cp,jg}@fgcz.ethz.ch
    From: inst/doc/poster.pdf

OK r-devel-linux-x86_64-fedora-clang

OK r-devel-linux-x86_64-fedora-gcc

OK r-devel-macos-arm64

OK r-devel-windows-x86_64

NOTE r-oldrel-macos-arm64

installed package size

  installed size is  6.6Mb
  sub-directories of 1Mb or more:
    data   2.3Mb
    libs   3.2Mb

NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  6.6Mb
  sub-directories of 1Mb or more:
    data   2.3Mb
    libs   3.2Mb

OK r-oldrel-windows-x86_64

OK r-patched-linux-x86_64

OK r-release-linux-x86_64

OK r-release-macos-arm64

OK r-release-macos-x86_64

OK r-release-windows-x86_64

Check History

NOTE 10 OK · 4 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026

NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Christian Panse <cp@fgcz.ethz.ch>’

Found the following (possibly) invalid file URI:
  URI: {cp,jg}@fgcz.ethz.ch
    From: inst/doc/poster.pdf

NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Christian Panse <cp@fgcz.ethz.ch>’

Found the following (possibly) invalid file URI:
  URI: {cp,jg}@fgcz.ethz.ch
    From: inst/doc/poster.pdf

NOTE r-oldrel-macos-arm64

installed package size

  installed size is  6.6Mb
  sub-directories of 1Mb or more:
    data   2.3Mb
    libs   3.2Mb

NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  6.6Mb
  sub-directories of 1Mb or more:
    data   2.3Mb
    libs   3.2Mb

Dependency Network

Version History

new 0.7.9 Mar 9, 2026