opusreader2
Read Spectroscopic Data from Bruker OPUS Binary Files
Description
Reads data from Bruker OPUS binary files of Fourier-Transform infrared spectrometers of the company Bruker Optics GmbH & Co. This package is released independently from Bruker, and Bruker and OPUS are registered trademarks of Bruker Optics GmbH & Co. KG. <https://www.bruker.com/en/products-and-solutions/infrared-and-raman/opus-spectroscopy-software/latest-release.html>. It lets you import both measurement data and parameters from OPUS files. The main method is `read_opus()`, which reads one or multiple OPUS files into a standardized list class. Behind the scenes, the reader parses the file header for assigning spectral blocks and reading binary data from the respective byte positions, using a reverse engineering approach. Infrared spectroscopy combined with chemometrics and machine learning is an established method to scale up chemical diagnostics in various industries and scientific fields.
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CRAN Check Status
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | ERROR |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (14 non-OK)
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re-building of vignette outputs
Error(s) in re-building vignettes: --- re-building 'opusreader2_introduction.Rmd' using rmarkdown File ../images/opus-measurement-settings.png not found in resource path Error: processing vignette 'opusreader2_introduction.Rmd' failed with diagnostics: pandoc document conversion failed with error 99 --- failed re-building 'opusreader2_introduction.Rmd' SUMMARY: processing the following file failed: 'opusreader2_introduction.Rmd' Error: Vignette re-building failed. Execution halted
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Check History
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 9, 2026
re-building of vignette outputs
Error(s) in re-building vignettes: --- re-building 'opusreader2_introduction.Rmd' using rmarkdown File ../images/opus-measurement-settings.png not found in resource path Error: processing vignette 'opusreader2_introduction.Rmd' failed with diagnostics: pandoc document conversion failed with error 99 --- failed re-building 'opusreader2_introduction.Rmd' SUMMARY: processing the following file failed: 'opusreader2_introduction.Rmd' Error: Vignette re-building failed. Execution halted