netdiffuseR

Analysis of Diffusion and Contagion Processes on Networks

v1.24.0 · Dec 9, 2025 · MIT + file LICENSE

Description

Empirical statistical analysis, visualization and simulation of diffusion and contagion processes on networks. The package implements algorithms for calculating network diffusion statistics such as transmission rate, hazard rates, exposure models, network threshold levels, infectiousness (contagion), and susceptibility. The package is inspired by work published in Valente, et al., (2015) <DOI:10.1016/j.socscimed.2015.10.001>; Valente (1995) <ISBN: 9781881303213>, Myers (2000) <DOI:10.1086/303110>, Iyengar and others (2011) <DOI:10.1287/mksc.1100.0566>, Burt (1987) <DOI:10.1086/228667>; among others.

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CRAN Check Status

5 ERROR

3 NOTE

6 OK

Show all 14 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	ERROR	470s
r-devel-linux-x86_64-debian-gcc	ERROR	291.6s
r-devel-linux-x86_64-fedora-clang	ERROR	630.5s
r-devel-linux-x86_64-fedora-gcc	ERROR	818s
r-devel-macos-arm64	OK	83s
r-devel-windows-x86_64	ERROR	374s
r-oldrel-macos-arm64	NOTE	86s
r-oldrel-macos-x86_64	NOTE	433s
r-oldrel-windows-x86_64	NOTE	420s
r-patched-linux-x86_64	OK	439.2s
r-release-linux-x86_64	OK	423.6s
r-release-macos-arm64	OK	82s
r-release-macos-x86_64	OK	441s
r-release-windows-x86_64	OK	352s

Check details (14 non-OK)

ERROR r-devel-linux-x86_64-debian-clang

examples

Running examples in ‘netdiffuseR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: round_to_seq
> ### Title: Takes a numeric vector and maps it into a finite length sequence
> ### Aliases: round_to_seq
> 
> ### ** Examples
> 
> 
> x <- rnorm(100)
> w <- data.frame(as.integer(round_to_seq(x, as_factor = TRUE)),x)
> plot(w,x)
Error in attr(x, "formula") %||% { : invalid formula
Calls: plot ... plot.data.frame -> <Anonymous> -> formula -> formula.default -> %||%
Execution halted
Examples with CPU (user + system) or elapsed time > 5s
                            user system elapsed
diffusionMap               6.509  0.017   8.930
degree_adoption_diagnostic 5.159  0.104   6.363
rewire_graph               4.913  0.141   6.859
exposure                   4.043  0.031   5.288
c.diffnet                  3.445  0.055   5.176

ERROR r-devel-linux-x86_64-debian-gcc

examples

Running examples in ‘netdiffuseR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: round_to_seq
> ### Title: Takes a numeric vector and maps it into a finite length sequence
> ### Aliases: round_to_seq
> 
> ### ** Examples
> 
> 
> x <- rnorm(100)
> w <- data.frame(as.integer(round_to_seq(x, as_factor = TRUE)),x)
> plot(w,x)
Error in attr(x, "formula") %||% { : invalid formula
Calls: plot ... plot.data.frame -> <Anonymous> -> formula -> formula.default -> %||%
Execution halted

ERROR r-devel-linux-x86_64-fedora-clang

examples

Running examples in ‘netdiffuseR-Ex.R’ failed
The error most likely occurred in:

> ### Name: round_to_seq
> ### Title: Takes a numeric vector and maps it into a finite length sequence
> ### Aliases: round_to_seq
> 
> ### ** Examples
> 
> 
> x <- rnorm(100)
> w <- data.frame(as.integer(round_to_seq(x, as_factor = TRUE)),x)
> plot(w,x)
Error in attr(x, "formula") %||% { : invalid formula
Calls: plot ... plot.data.frame -> <Anonymous> -> formula -> formula.default -> %||%
Execution halted

ERROR r-devel-linux-x86_64-fedora-gcc

examples

Running examples in ‘netdiffuseR-Ex.R’ failed
The error most likely occurred in:

> ### Name: round_to_seq
> ### Title: Takes a numeric vector and maps it into a finite length sequence
> ### Aliases: round_to_seq
> 
> ### ** Examples
> 
> 
> x <- rnorm(100)
> w <- data.frame(as.integer(round_to_seq(x, as_factor = TRUE)),x)
> plot(w,x)
Error in attr(x, "formula") %||% { : invalid formula
Calls: plot ... plot.data.frame -> <Anonymous> -> formula -> formula.default -> %||%
Execution halted

OK r-devel-macos-arm64

ERROR r-devel-windows-x86_64

examples

Running examples in 'netdiffuseR-Ex.R' failed
The error most likely occurred in:

> ### Name: round_to_seq
> ### Title: Takes a numeric vector and maps it into a finite length sequence
> ### Aliases: round_to_seq
> 
> ### ** Examples
> 
> 
> x <- rnorm(100)
> w <- data.frame(as.integer(round_to_seq(x, as_factor = TRUE)),x)
> plot(w,x)
Error in attr(x, "formula") %||% { : invalid formula
Calls: plot ... plot.data.frame -> <Anonymous> -> formula -> formula.default -> %||%
Execution halted

NOTE r-oldrel-macos-arm64

installed package size

  installed size is 10.8Mb
  sub-directories of 1Mb or more:
    doc    2.4Mb
    help   1.3Mb
    libs   5.8Mb

NOTE r-oldrel-macos-x86_64

installed package size

  installed size is 10.8Mb
  sub-directories of 1Mb or more:
    doc    2.4Mb
    help   1.3Mb
    libs   5.8Mb

NOTE r-oldrel-windows-x86_64

installed package size

  installed size is  6.5Mb
  sub-directories of 1Mb or more:
    doc    2.4Mb
    help   1.3Mb
    libs   1.5Mb

OK r-patched-linux-x86_64

OK r-release-linux-x86_64

OK r-release-macos-arm64

OK r-release-macos-x86_64

OK r-release-windows-x86_64

Check History

ERROR 6 OK · 3 NOTE · 0 WARNING · 5 ERROR · 0 FAILURE Mar 9, 2026

ERROR r-devel-linux-x86_64-debian-clang

examples

Running examples in ‘netdiffuseR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: round_to_seq
> ### Title: Takes a numeric vector and maps it into a finite length sequence
> ### Aliases: round_to_seq
> 
> ### ** Examples
> 
> 
> x <- rnorm(100)
> w <- data.frame(as.integer(round_to_seq(x, as_factor = TRUE)),x)
> plot(w,x)
Error in attr(x, "formula") %||% { : invalid formula
Calls: plot ... plot.data.frame -> <Anonymous> -> fo

ERROR r-devel-linux-x86_64-debian-gcc

examples

Running examples in ‘netdiffuseR-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: round_to_seq
> ### Title: Takes a numeric vector and maps it into a finite length sequence
> ### Aliases: round_to_seq
> 
> ### ** Examples
> 
> 
> x <- rnorm(100)
> w <- data.frame(as.integer(round_to_seq(x, as_factor = TRUE)),x)
> plot(w,x)
Error in attr(x, "formula") %||% { : invalid formula
Calls: plot ... plot.data.frame -> <Anonymous> -> fo

ERROR r-devel-linux-x86_64-fedora-clang

examples

Running examples in ‘netdiffuseR-Ex.R’ failed
The error most likely occurred in:

> ### Name: round_to_seq
> ### Title: Takes a numeric vector and maps it into a finite length sequence
> ### Aliases: round_to_seq
> 
> ### ** Examples
> 
> 
> x <- rnorm(100)
> w <- data.frame(as.integer(round_to_seq(x, as_factor = TRUE)),x)
> plot(w,x)
Error in attr(x, "formula") %||% { : invalid formula
Calls: plot ... plot.data.frame -> <Anonymous> -> formula -> formula.default -> %||%
Execution halted

ERROR r-devel-linux-x86_64-fedora-gcc

examples

Running examples in ‘netdiffuseR-Ex.R’ failed
The error most likely occurred in:

> ### Name: round_to_seq
> ### Title: Takes a numeric vector and maps it into a finite length sequence
> ### Aliases: round_to_seq
> 
> ### ** Examples
> 
> 
> x <- rnorm(100)
> w <- data.frame(as.integer(round_to_seq(x, as_factor = TRUE)),x)
> plot(w,x)
Error in attr(x, "formula") %||% { : invalid formula
Calls: plot ... plot.data.frame -> <Anonymous> -> formula -> formula.default -> %||%
Execution halted

ERROR r-devel-windows-x86_64

examples

Running examples in 'netdiffuseR-Ex.R' failed
The error most likely occurred in:

> ### Name: round_to_seq
> ### Title: Takes a numeric vector and maps it into a finite length sequence
> ### Aliases: round_to_seq
> 
> ### ** Examples
> 
> 
> x <- rnorm(100)
> w <- data.frame(as.integer(round_to_seq(x, as_factor = TRUE)),x)
> plot(w,x)
Error in attr(x, "formula") %||% { : invalid formula
Calls: plot ... plot.data.frame -> <Anonymous> -> formula -> formula.default -> %||%
Execution halted

NOTE r-oldrel-macos-arm64

installed package size

  installed size is 10.8Mb
  sub-directories of 1Mb or more:
    doc    2.4Mb
    help   1.3Mb
    libs   5.8Mb

NOTE r-oldrel-macos-x86_64

installed package size

  installed size is 10.8Mb
  sub-directories of 1Mb or more:
    doc    2.4Mb
    help   1.3Mb
    libs   5.8Mb

NOTE r-oldrel-windows-x86_64

installed package size

  installed size is  6.5Mb
  sub-directories of 1Mb or more:
    doc    2.4Mb
    help   1.3Mb
    libs   1.5Mb

Reverse Dependencies (1)

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Version History

new 1.24.0 Mar 9, 2026

Maintainer

George Vega Yon

Dependencies

Depends

R (>= 3.1.1)

Imports

Rcpp (>= 0.12.1) sna network networkDynamic Matrix MASS MatchIt SparseM methods grDevices graphics stats utils boot igraph viridisLite

Suggests

covr testthat knitr rmarkdown ape RSiena survival

Compilation

Needs compilation

First Published

Mar 9, 2026

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