mixKernel
Omics Data Integration Using Kernel Methods
Description
Kernel-based methods are powerful methods for integrating heterogeneous types of data. mixKernel aims at providing methods to combine kernel for unsupervised exploratory analysis. Different solutions are provided to compute a meta-kernel, in a consensus way or in a way that best preserves the original topology of the data. mixKernel also integrates kernel PCA to visualize similarities between samples in a non linear space and from the multiple source point of view <doi:10.1093/bioinformatics/btx682>. A method to select (as well as funtions to display) important variables is also provided <doi:10.1093/nargab/lqac014>.
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package dependencies
Package required but not available: ‘phyloseq’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
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Installation failed. See 'd:/Rcompile/CRANpkg/local/4.6/mixKernel.Rcheck/00install.out' for details.
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Installation failed. See 'd:/Rcompile/CRANpkg/local/4.4/mixKernel.Rcheck/00install.out' for details.
package dependencies
Package required but not available: ‘phyloseq’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
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ERROR 9 OK · 0 NOTE · 0 WARNING · 5 ERROR · 0 FAILURE Mar 9, 2026
package dependencies
Package required but not available: ‘phyloseq’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
whether package can be installed
Installation failed. See 'd:/Rcompile/CRANpkg/local/4.6/mixKernel.Rcheck/00install.out' for details.
package dependencies
Package required but not available: ‘phyloseq’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
whether package can be installed
Installation failed. See 'd:/Rcompile/CRANpkg/local/4.5/mixKernel.Rcheck/00install.out' for details.
whether package can be installed
Installation failed. See 'd:/Rcompile/CRANpkg/local/4.4/mixKernel.Rcheck/00install.out' for details.