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microbial

Do 16s Data Analysis and Generate Figures

v0.0.22 · Oct 6, 2025 · GPL-3

Description

Provides functions to enhance the available statistical analysis procedures in R by providing simple functions to analysis and visualize the 16S rRNA data.Here we present a tutorial with minimum working examples to demonstrate usage and dependencies.

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CRAN Check Status

2 ERROR
12 OK
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Flavor Status
r-devel-linux-x86_64-debian-clang ERROR
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 ERROR
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (14 non-OK)
ERROR r-devel-linux-x86_64-debian-clang

package dependencies

Packages required but not available:
  'phyloseq', 'DESeq2', 'SummarizedExperiment'

Packages suggested but not available for checking:
  'dada2', 'Biostrings', 'DECIPHER'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
OK r-devel-linux-x86_64-debian-gcc

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OK r-devel-linux-x86_64-fedora-clang

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OK r-devel-linux-x86_64-fedora-gcc

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OK r-devel-macos-arm64

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OK r-devel-windows-x86_64

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OK r-oldrel-macos-arm64

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OK r-oldrel-macos-x86_64

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OK r-oldrel-windows-x86_64

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ERROR r-patched-linux-x86_64

package dependencies

Package required but not available: ‘phyloseq’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
OK r-release-linux-x86_64

*


            
OK r-release-macos-arm64

*


            
OK r-release-macos-x86_64

*


            
OK r-release-windows-x86_64

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Check History

ERROR 12 OK · 0 NOTE · 0 WARNING · 2 ERROR · 0 FAILURE Mar 9, 2026
ERROR r-devel-linux-x86_64-debian-clang

package dependencies

Packages required but not available:
  'phyloseq', 'DESeq2', 'SummarizedExperiment'

Packages suggested but not available for checking:
  'dada2', 'Biostrings', 'DECIPHER'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
ERROR r-patched-linux-x86_64

package dependencies

Package required but not available: ‘phyloseq’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.

Dependency Network

Dependencies Reverse dependencies dplyr plyr magrittr broom phyloseq vegan rlang ggplot2 ggpubr DESeq2 SummarizedExperiment S4Vectors rstatix tidyr phangorn +2 more dependencies microbial

Version History

new 0.0.22 Mar 9, 2026