Description
Constructs genetic linkage maps in autopolyploid full-sib populations. Uses pairwise recombination fraction estimation as the first source of information to sequentially position allelic variants in specific homologous chromosomes. For situations where pairwise analysis has limited power, the algorithm relies on the multilocus likelihood obtained through a hidden Markov model (HMM). Methods are described in Mollinari and Garcia (2019) <doi:10.1534/g3.119.400378> and Mollinari et al. (2020) <doi:10.1534/g3.119.400620>.
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| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | NOTE |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (17 non-OK)
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for GNU extensions in Makefiles
GNU make is a SystemRequirements.
installed package size
installed size is 12.6Mb
sub-directories of 1Mb or more:
R 2.7Mb
data 3.0Mb
libs 4.9Mb
for GNU extensions in Makefiles
GNU make is a SystemRequirements.
installed package size
installed size is 13.5Mb
sub-directories of 1Mb or more:
R 3.8Mb
data 3.0Mb
libs 4.7Mb
for GNU extensions in Makefiles
GNU make is a SystemRequirements.
installed package size
installed size is 8.3Mb
sub-directories of 1Mb or more:
R 2.7Mb
data 2.4Mb
libs 1.3Mb
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Check History
NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
installed package size
installed size is 12.6Mb
sub-directories of 1Mb or more:
R 2.7Mb
data 3.0Mb
libs 4.9Mb
installed package size
installed size is 13.5Mb
sub-directories of 1Mb or more:
R 3.8Mb
data 3.0Mb
libs 4.7Mb
installed package size
installed size is 8.3Mb
sub-directories of 1Mb or more:
R 2.7Mb
data 2.4Mb
libs 1.3Mb