lfc
Log Fold Change Distribution Tools for Working with Ratios of Counts
v0.2.3
·
Apr 19, 2023
·
Apache License (>= 2)
Description
Ratios of count data such as obtained from RNA-seq are modelled using Bayesian statistics to derive posteriors for effects sizes. This approach is described in Erhard & Zimmer (2015) <doi:10.1093/nar/gkv696> and Erhard (2018) <doi:10.1093/bioinformatics/bty471>.
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CRAN Check Status
1
ERROR
1
NOTE
12
OK
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | ERROR |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (15 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Florian Erhard <florian.erhard@uni-wuerzburg.de>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Florian",
family = "Erhard",
role = c("aut", "cre"),
email = "florian.erhard@uni-wuerzburg.de")
as necessary.
ERROR
r-devel-linux-x86_64-debian-clang
re-building of vignette outputs
Error(s) in re-building vignettes:
...
--- re-building ‘lfc_vignette.Rmd’ using rmarkdown
Quitting from lfc_vignette.Rmd:34-47 [unnamed-chunk-1]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `library()`:
! there is no package called 'DESeq2'
---
Backtrace:
▆
1. └─base::library(DESeq2)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'lfc_vignette.Rmd' failed with diagnostics:
there is no package called 'DESeq2'
--- failed re-building ‘lfc_vignette.Rmd’
SUMMARY: processing the following file failed:
‘lfc_vignette.Rmd’
Error: Vignette re-building failed.
Execution halted
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Florian Erhard <florian.erhard@uni-wuerzburg.de>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Florian",
family = "Erhard",
role = c("aut", "cre"),
email = "florian.erhard@uni-wuerzburg.de")
as necessary.
OK
r-devel-linux-x86_64-fedora-clang
*
OK
r-devel-linux-x86_64-fedora-gcc
*
OK
r-devel-macos-arm64
*
OK
r-devel-windows-x86_64
*
OK
r-oldrel-macos-arm64
*
OK
r-oldrel-macos-x86_64
*
OK
r-oldrel-windows-x86_64
*
OK
r-patched-linux-x86_64
*
OK
r-release-linux-x86_64
*
OK
r-release-macos-arm64
*
OK
r-release-macos-x86_64
*
OK
r-release-windows-x86_64
*
Check History
ERROR 12 OK · 1 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 9, 2026
ERROR
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Florian Erhard <florian.erhard@uni-wuerzburg.de>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Florian",
family = "Erhard",
role = c("aut", "cre"),
email = "florian.erhard@uni-wuerzburg.de")
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Florian Erhard <florian.erhard@uni-wuerzburg.de>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Florian",
family = "Erhard",
role = c("aut", "cre"),
email = "florian.erhard@uni-wuerzburg.de")
as necessary.
Reverse Dependencies (1)
imports
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Version History
new
0.2.3
Mar 9, 2026