hoardeR

Collect and Retrieve Annotation Data for Various Genomic Data Using Different Webservices

v0.10 · Apr 8, 2024 · GPL (>= 2)

Description

Cross-species identification of novel gene candidates using the NCBI web service is provided. Further, sets of miRNA target genes can be identified by using the targetscan.org API.

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CRAN Check Status

5 ERROR

9 OK

Show all 14 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	ERROR	3.9s
r-devel-linux-x86_64-debian-gcc	ERROR	7.7s
r-devel-linux-x86_64-fedora-clang	ERROR	17.6s
r-devel-linux-x86_64-fedora-gcc	ERROR	16.8s
r-devel-macos-arm64	ERROR	7s
r-devel-windows-x86_64	OK	238s
r-oldrel-macos-arm64	OK
r-oldrel-macos-x86_64	OK	195s
r-oldrel-windows-x86_64	OK	317s
r-patched-linux-x86_64	OK	256.1s
r-release-linux-x86_64	OK	255s
r-release-macos-arm64	OK
r-release-macos-x86_64	OK	295s
r-release-windows-x86_64	OK	242s

Check details (14 non-OK)

ERROR r-devel-linux-x86_64-debian-clang

package dependencies

Packages required but not available:
  'Biostrings', 'GenomicTools.fileHandler', 'Rsamtools'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.

ERROR r-devel-linux-x86_64-debian-gcc

whether package can be installed

Installation failed.
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/hoardeR.Rcheck/00install.out’ for details.

ERROR r-devel-linux-x86_64-fedora-clang

whether package can be installed

Installation failed.
See ‘/data/gannet/ripley/R/packages/tests-clang/hoardeR.Rcheck/00install.out’ for details.

ERROR r-devel-linux-x86_64-fedora-gcc

whether package can be installed

Installation failed.
See ‘/data/gannet/ripley/R/packages/tests-devel/hoardeR.Rcheck/00install.out’ for details.

ERROR r-devel-macos-arm64

whether package can be installed

Installation failed.
See ‘/Volumes/Builds/packages/sonoma-arm64/results/4.6/hoardeR.Rcheck/00install.out’ for details.

OK r-devel-windows-x86_64

OK r-oldrel-macos-arm64

OK r-oldrel-macos-x86_64

OK r-oldrel-windows-x86_64

OK r-patched-linux-x86_64

OK r-release-linux-x86_64

OK r-release-macos-arm64

OK r-release-macos-x86_64

OK r-release-windows-x86_64

Check History

ERROR 9 OK · 0 NOTE · 0 WARNING · 5 ERROR · 0 FAILURE Mar 9, 2026

ERROR r-devel-linux-x86_64-debian-clang

package dependencies

Packages required but not available:
  'Biostrings', 'GenomicTools.fileHandler', 'Rsamtools'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.

ERROR r-devel-linux-x86_64-debian-gcc

whether package can be installed

Installation failed.
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/hoardeR.Rcheck/00install.out’ for details.

ERROR r-devel-linux-x86_64-fedora-clang

whether package can be installed

Installation failed.
See ‘/data/gannet/ripley/R/packages/tests-clang/hoardeR.Rcheck/00install.out’ for details.

ERROR r-devel-linux-x86_64-fedora-gcc

whether package can be installed

Installation failed.
See ‘/data/gannet/ripley/R/packages/tests-devel/hoardeR.Rcheck/00install.out’ for details.

ERROR r-devel-macos-arm64

whether package can be installed

Installation failed.
See ‘/Volumes/Builds/packages/sonoma-arm64/results/4.6/hoardeR.Rcheck/00install.out’ for details.

Dependency Network

Version History

new 0.10 Mar 9, 2026