Skip to content

hJAM

Hierarchical Joint Analysis of Marginal Summary Statistics

v1.0.0 · Feb 20, 2020 · MIT + file LICENSE

Description

Provides functions to implement a hierarchical approach which is designed to perform joint analysis of summary statistics using the framework of Mendelian Randomization or transcriptome analysis. Reference: Lai Jiang, Shujing Xu, Nicholas Mancuso, Paul J. Newcombe, David V. Conti (2020). "A Hierarchical Approach Using Marginal Summary Statistics for Multiple Intermediates in a Mendelian Randomization or Transcriptome Analysis." <bioRxiv><doi:10.1101/2020.02.03.924241>.

Downloads

166

Last 30 days

19717th

166

Last 90 days

166

Last year

CRAN Check Status

2 NOTE
12 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (14 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Lai Jiang <jian848@usc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Lai",
                    family = "Jiang",
                    role = c("aut", "cre"),
                    email = "jian848@usc.edu")
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘get_cond_alpha.Rd’:
    https://doi.org/10.1101/2020.02.03.924241
  File ‘hJAM_egger.Rd’:
    https://doi.org/10.1101/2020.02.03.924241
  File ‘hJAM_lnreg.Rd’:
    https://doi.org/10.1101/2020.02.03.924241
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Lai Jiang <jian848@usc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Lai",
                    family = "Jiang",
                    role = c("aut", "cre"),
                    email = "jian848@usc.edu")
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘get_cond_alpha.Rd’:
    https://doi.org/10.1101/2020.02.03.924241
  File ‘hJAM_egger.Rd’:
    https://doi.org/10.1101/2020.02.03.924241
  File ‘hJAM_lnreg.Rd’:
    https://doi.org/10.1101/2020.02.03.924241
OK r-devel-linux-x86_64-fedora-clang

*


            
OK r-devel-linux-x86_64-fedora-gcc

*


            
OK r-devel-macos-arm64

*


            
OK r-devel-windows-x86_64

*


            
OK r-oldrel-macos-arm64

*


            
OK r-oldrel-macos-x86_64

*


            
OK r-oldrel-windows-x86_64

*


            
OK r-patched-linux-x86_64

*


            
OK r-release-linux-x86_64

*


            
OK r-release-macos-arm64

*


            
OK r-release-macos-x86_64

*


            
OK r-release-windows-x86_64

*


            

Check History

NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Lai Jiang <jian848@usc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Lai",
                    family = "Jiang",
                    role = c("aut", "cre"),
                    email = "jian848@usc.edu")
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘get_cond_alpha.Rd’:
    https://doi.org/10.1101/2020.02.03.924241
  File ‘hJAM_egger.Rd’:
    https://doi.org/10.1101/2020.02.03.924241
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Lai Jiang <jian848@usc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Lai",
                    family = "Jiang",
                    role = c("aut", "cre"),
                    email = "jian848@usc.edu")
as necessary.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘get_cond_alpha.Rd’:
    https://doi.org/10.1101/2020.02.03.924241
  File ‘hJAM_egger.Rd’:
    https://doi.org/10.1101/2020.02.03.924241

Dependency Network

Dependencies Reverse dependencies ggplot2 ggpubr dplyr reshape2 hJAM

Version History

new 1.0.0 Mar 10, 2026