Skip to content

glmpca

Dimension Reduction of Non-Normally Distributed Data

v0.2.0 · Jul 18, 2020 · LGPL (>= 3) | file LICENSE
CRAN GitHub Mirror

Description

Implements a generalized version of principal components analysis (GLM-PCA) for dimension reduction of non-normally distributed data such as counts or binary matrices. Townes FW, Hicks SC, Aryee MJ, Irizarry RA (2019) <doi:10.1186/s13059-019-1861-6>. Townes FW (2019) <arXiv:1907.02647>.

Downloads

796

Last 30 days

4419th

796

Last 90 days

796

Last year

CRAN Check Status

2 NOTE
12 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (14 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘F. William Townes <will.townes@gmail.com>’

The Description field contains
  <arXiv:1907.02647>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘glmpca.Rd’:
    https://doi.org/10.1186/s13059-019-1861-6
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘F. William Townes <will.townes@gmail.com>’

The Description field contains
  <arXiv:1907.02647>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘glmpca.Rd’:
    https://doi.org/10.1186/s13059-019-1861-6
OK r-devel-linux-x86_64-fedora-clang

*


            

            

              

                OK
                r-devel-linux-x86_64-fedora-gcc
              

              
*

              

            

            

              

                OK
                r-devel-macos-arm64
              

              
*

              

            

            

              

                OK
                r-devel-windows-x86_64
              

              
*

              

            

            

              

                OK
                r-oldrel-macos-arm64
              

              
*

              

            

            

              

                OK
                r-oldrel-macos-x86_64
              

              
*

              

            

            

              

                OK
                r-oldrel-windows-x86_64
              

              
*

              

            

            

              

                OK
                r-patched-linux-x86_64
              

              
*

              

            

            

              

                OK
                r-release-linux-x86_64
              

              
*

              

            

            

              

                OK
                r-release-macos-arm64
              

              
*

              

            

            

              

                OK
                r-release-macos-x86_64
              

              
*

              

            

            

              

                OK
                r-release-windows-x86_64
              

              
*

              

            

          

        

      



      

      
      

        
Check History

        

          

            
              NOTE
              
                12 OK ·                 2 NOTE ·                 0 WARNING ·                 0 ERROR ·                 0 FAILURE              
              Mar 9, 2026
            
            

              

                

                  NOTE
                  r-devel-linux-x86_64-debian-clang
                

                
CRAN incoming feasibility

                
Maintainer: ‘F. William Townes <will.townes@gmail.com>’

The Description field contains
  <arXiv:1907.02647>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘glmpca.Rd’:
    https://doi.org/10.1186/s13059-019-1861-6

              

              

                

                  NOTE
                  r-devel-linux-x86_64-debian-gcc
                

                
CRAN incoming feasibility

                
Maintainer: ‘F. William Townes <will.townes@gmail.com>’

The Description field contains
  <arXiv:1907.02647>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.

Found the following URLs which should use \doi (with the DOI name only):
  File ‘glmpca.Rd’:
    https://doi.org/10.1186/s13059-019-1861-6

              

            

          

        

      


      
      

        
Reverse Dependencies (2)

        

          
imports

          

            pmartR
            scpoisson
          

        

      


      
      

        
Dependency Network

        

          
            

            
            
            Dependencies
            
            Reverse dependencies

            
            

            
            
            

            
            
              
              MASS
            

            
            
              
              pmartR
            
            
              
              scpoisson
            

            
            
            glmpca
          
        

      


      
      

        
Version History

        

          

            new
            0.2.0
            Mar 9, 2026