Description
Imports the 'gkmSVM' v2.0 functionalities into R <https://www.beerlab.org/gkmsvm/> It also uses the 'kernlab' library (separate R package by different authors) for various SVM algorithms. Users should note that the suggested packages 'rtracklayer', 'GenomicRanges', 'BSgenome', 'BiocGenerics', 'Biostrings', 'GenomeInfoDb', 'IRanges', and 'S4Vectors' are all BioConductor packages <https://bioconductor.org>.
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CRAN Check Status
4
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10
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Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (14 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Mike Beer <mbeer@jhu.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Mahmoud",
family = "Ghandi",
role = "aut"),
person(given = "Mike",
family = "Beer",
role = "cre",
email = "mbeer@jhu.edu"))
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Mike Beer <mbeer@jhu.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Mahmoud",
family = "Ghandi",
role = "aut"),
person(given = "Mike",
family = "Beer",
role = "cre",
email = "mbeer@jhu.edu"))
as necessary.
OK
r-devel-linux-x86_64-fedora-clang
*
OK
r-devel-linux-x86_64-fedora-gcc
*
OK
r-devel-macos-arm64
*
OK
r-devel-windows-x86_64
*
NOTE
r-oldrel-macos-arm64
package dependencies
Packages suggested but not available for checking: 'BSgenome.Hsapiens.UCSC.hg18.masked', 'BSgenome.Hsapiens.UCSC.hg19.masked'
NOTE
r-oldrel-macos-x86_64
package dependencies
Packages suggested but not available for checking: 'BSgenome.Hsapiens.UCSC.hg18.masked', 'BSgenome.Hsapiens.UCSC.hg19.masked'
OK
r-oldrel-windows-x86_64
*
OK
r-patched-linux-x86_64
*
OK
r-release-linux-x86_64
*
OK
r-release-macos-arm64
*
OK
r-release-macos-x86_64
*
OK
r-release-windows-x86_64
*
Check History
NOTE 10 OK · 4 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Mike Beer <mbeer@jhu.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Mahmoud",
family = "Ghandi",
role = "aut"),
person(given = "Mike",
family = "Beer",
role = "cre",
email = "mbeer@jhu.edu"))
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Mike Beer <mbeer@jhu.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Mahmoud",
family = "Ghandi",
role = "aut"),
person(given = "Mike",
family = "Beer",
role = "cre",
email = "mbeer@jhu.edu"))
as necessary.
NOTE
r-oldrel-macos-arm64
package dependencies
Packages suggested but not available for checking: 'BSgenome.Hsapiens.UCSC.hg18.masked', 'BSgenome.Hsapiens.UCSC.hg19.masked'
NOTE
r-oldrel-macos-x86_64
package dependencies
Packages suggested but not available for checking: 'BSgenome.Hsapiens.UCSC.hg18.masked', 'BSgenome.Hsapiens.UCSC.hg19.masked'
Dependency Network
Version History
new
0.83.0
Mar 9, 2026