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gcplyr

Wrangle and Analyze Growth Curve Data

v1.12.0 · Jul 29, 2025 · MIT + file LICENSE

Description

Easy wrangling and model-free analysis of microbial growth curve data, as commonly output by plate readers. Tools for reshaping common plate reader outputs into 'tidy' formats and merging them with design information, making data easy to work with using 'gcplyr' and other packages. Also streamlines common growth curve processing steps, like smoothing and calculating derivatives, and facilitates model-free characterization and analysis of growth data. See methods at <https://mikeblazanin.github.io/gcplyr/>.

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CRAN Check Status

2 NOTE
12 OK
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r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (14 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Mike Blazanin <mikeblazanin@gmail.com>’

Found the following (possibly) invalid file URIs:
  URI: vignette(%2206_analyze%22).pdf
    From: inst/doc/gc05_process.pdf
  URI: vignette(%2207_noise%22).pdf
    From: inst/doc/gc05_process.pdf
  URI: vignette(%2205_process%22).pdf
    From: inst/doc/gc06_analyze.pdf
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Mike Blazanin <mikeblazanin@gmail.com>’

Found the following (possibly) invalid file URIs:
  URI: vignette(%2206_analyze%22).pdf
    From: inst/doc/gc05_process.pdf
  URI: vignette(%2207_noise%22).pdf
    From: inst/doc/gc05_process.pdf
  URI: vignette(%2205_process%22).pdf
    From: inst/doc/gc06_analyze.pdf
OK r-devel-linux-x86_64-fedora-clang

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OK r-devel-linux-x86_64-fedora-gcc

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OK r-devel-macos-arm64

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OK r-devel-windows-x86_64

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OK r-oldrel-macos-arm64

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OK r-oldrel-macos-x86_64

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OK r-oldrel-windows-x86_64

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OK r-patched-linux-x86_64

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OK r-release-linux-x86_64

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OK r-release-macos-arm64

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OK r-release-macos-x86_64

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OK r-release-windows-x86_64

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Check History

NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Mike Blazanin <mikeblazanin@gmail.com>’

Found the following (possibly) invalid file URIs:
  URI: vignette(%2206_analyze%22).pdf
    From: inst/doc/gc05_process.pdf
  URI: vignette(%2207_noise%22).pdf
    From: inst/doc/gc05_process.pdf
  URI: vignette(%2205_process%22).pdf
    From: inst/doc/gc06_analyze.pdf
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Mike Blazanin <mikeblazanin@gmail.com>’

Found the following (possibly) invalid file URIs:
  URI: vignette(%2206_analyze%22).pdf
    From: inst/doc/gc05_process.pdf
  URI: vignette(%2207_noise%22).pdf
    From: inst/doc/gc05_process.pdf
  URI: vignette(%2205_process%22).pdf
    From: inst/doc/gc06_analyze.pdf

Dependency Network

Dependencies Reverse dependencies dplyr rlang tidyr gcplyr

Version History

new 1.12.0 Mar 9, 2026