gatoRs
Geographic and Taxonomic Occurrence R-Based Scrubbing
v1.0.2
·
May 16, 2024
·
GPL-3
Description
Streamlines downloading and cleaning biodiversity data from Integrated Digitized Biocollections (iDigBio) and the Global Biodiversity Information Facility (GBIF).
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CRAN Check Status
13
OK
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check History
OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE May 5, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 30, 2026
ERROR
r-devel-linux-x86_64-debian-gcc
examples
Running examples in ‘gatoRs-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get_gbif
> ### Title: Used in gators_download() - Download data from the Global
> ### Biodiversity In
...[truncated]...
xamples
>
> df <- get_gbif(c("Galax urceolata", "Galax aphylla"), limit = 5)
Error: Service Unavailable
Execution halted
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
gators_download 0.538 0.087 115.687
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 24, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 22, 2026
ERROR
r-devel-windows-x86_64
examples
Running examples in 'gatoRs-Ex.R' failed
The error most likely occurred in:
> ### Name: gators_download
> ### Title: Download - Download specimen data from both iDigBio and GBIF
> ### Aliases: gators_download
>
> ### ** Examples
>
> df <- gators_download(synonyms.list = c("Galax urceolata", "Galax aphylla"), limit = 10)
Error: Service Unavailable
Execution halted