ftrCOOL
Feature Extraction from Biological Sequences
v2.0.0
·
Nov 29, 2021
·
GPL-3
Description
Extracts features from biological sequences. It contains most features which are presented in related work and also includes features which have never been introduced before. It extracts numerous features from nucleotide and peptide sequences. Each feature converts the input sequences to discrete numbers in order to use them as predictors in machine learning models. There are many features and information which are hidden inside a sequence. Utilizing the package, users can convert biological sequences to discrete models based on chosen properties. References: 'iLearn' 'Z. Chen et al.' (2019) <DOI:10.1093/bib/bbz041>. 'iFeature' 'Z. Chen et al.' (2018) <DOI:10.1093/bioinformatics/bty140>. <https://CRAN.R-project.org/package=rDNAse>. 'PseKRAAC' 'Y. Zuo et al.' 'PseKRAAC: a flexible web server for generating pseudo K-tuple reduced amino acids composition' (2017) <DOI:10.1093/bioinformatics/btw564>. 'iDNA6mA-PseKNC' 'P. Feng et al.' 'iDNA6mA-PseKNC: Identifying DNA N6-methyladenosine sites by incorporating nucleotide physicochemical properties into PseKNC' (2019) <DOI:10.1016/j.ygeno.2018.01.005>. 'I. Dubchak et al.' 'Prediction of protein folding class using global description of amino acid sequence' (1995) <DOI:10.1073/pnas.92.19.8700>. 'W. Chen et al.' 'Identification and analysis of the N6-methyladenosine in the Saccharomyces cerevisiae transcriptome' (2015) <DOI:10.1038/srep13859>.
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| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
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| r-devel-linux-x86_64-fedora-gcc | NOTE |
| r-devel-macos-arm64 | NOTE |
| r-devel-windows-x86_64 | NOTE |
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Check details (16 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Sare Amerifar <sare.ameri.01@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Sare",
family = "Amerifar",
role = c("aut", "cre"),
email = "sare.ameri.01@gmail.com")
as necessary.
NOTE
r-devel-linux-x86_64-debian-clang
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AU, CC, CG, CU, GG, GU, U}
| ^
checkRd: (-1) MMI_RNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAU, ACC, ACG, ACU, AGG, AGU, AUU, CCC, CCG, CCU, CGG, CGU, CUU, GGG, GGU, GUU and UUU}
| ^
checkRd: (-1) binary_5bit_T1.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 5 dimentional vector i.e.{e1, e2, e3, e4, e5}.
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_6bit.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 6 dimentional vector i.e.{e1, e2, e3, e4, e5, e6}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Sare Amerifar <sare.ameri.01@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Sare",
family = "Amerifar",
role = c("aut", "cre"),
email = "sare.ameri.01@gmail.com")
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AU, CC, CG, CU, GG, GU, U}
| ^
checkRd: (-1) MMI_RNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAU, ACC, ACG, ACU, AGG, AGU, AUU, CCC, CCG, CCU, CGG, CGU, CUU, GGG, GGU, GUU and UUU}
| ^
checkRd: (-1) binary_5bit_T1.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 5 dimentional vector i.e.{e1, e2, e3, e4, e5}.
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_6bit.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 6 dimentional vector i.e.{e1, e2, e3, e4, e5, e6}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
NOTE
r-devel-linux-x86_64-fedora-clang
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AU, CC, CG, CU, GG, GU, U}
| ^
checkRd: (-1) MMI_RNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAU, ACC, ACG, ACU, AGG, AGU, AUU, CCC, CCG, CCU, CGG, CGU, CUU, GGG, GGU, GUU and UUU}
| ^
checkRd: (-1) binary_5bit_T1.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 5 dimentional vector i.e.{e1, e2, e3, e4, e5}.
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_6bit.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 6 dimentional vector i.e.{e1, e2, e3, e4, e5, e6}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
NOTE
r-devel-linux-x86_64-fedora-gcc
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AU, CC, CG, CU, GG, GU, U}
| ^
checkRd: (-1) MMI_RNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAU, ACC, ACG, ACU, AGG, AGU, AUU, CCC, CCG, CCU, CGG, CGU, CUU, GGG, GGU, GUU and UUU}
| ^
checkRd: (-1) binary_5bit_T1.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 5 dimentional vector i.e.{e1, e2, e3, e4, e5}.
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_6bit.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 6 dimentional vector i.e.{e1, e2, e3, e4, e5, e6}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
NOTE
r-devel-macos-arm64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AU, CC, CG, CU, GG, GU, U}
| ^
checkRd: (-1) MMI_RNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAU, ACC, ACG, ACU, AGG, AGU, AUU, CCC, CCG, CCU, CGG, CGU, CUU, GGG, GGU, GUU and UUU}
| ^
checkRd: (-1) binary_5bit_T1.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 5 dimentional vector i.e.{e1, e2, e3, e4, e5}.
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_6bit.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 6 dimentional vector i.e.{e1, e2, e3, e4, e5, e6}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
NOTE
r-devel-windows-x86_64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AU, CC, CG, CU, GG, GU, U}
| ^
checkRd: (-1) MMI_RNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAU, ACC, ACG, ACU, AGG, AGU, AUU, CCC, CCG, CCU, CGG, CGU, CUU, GGG, GGU, GUU and UUU}
| ^
checkRd: (-1) binary_5bit_T1.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 5 dimentional vector i.e.{e1, e2, e3, e4, e5}.
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_6bit.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 6 dimentional vector i.e.{e1, e2, e3, e4, e5, e6}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
NOTE
r-oldrel-macos-arm64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AU, CC, CG, CU, GG, GU, U}
| ^
checkRd: (-1) MMI_RNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAU, ACC, ACG, ACU, AGG, AGU, AUU, CCC, CCG, CCU, CGG, CGU, CUU, GGG, GGU, GUU and UUU}
| ^
checkRd: (-1) binary_5bit_T1.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 5 dimentional vector i.e.{e1, e2, e3, e4, e5}.
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_6bit.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 6 dimentional vector i.e.{e1, e2, e3, e4, e5, e6}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
NOTE
r-oldrel-macos-x86_64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AU, CC, CG, CU, GG, GU, U}
| ^
checkRd: (-1) MMI_RNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAU, ACC, ACG, ACU, AGG, AGU, AUU, CCC, CCG, CCU, CGG, CGU, CUU, GGG, GGU, GUU and UUU}
| ^
checkRd: (-1) binary_5bit_T1.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 5 dimentional vector i.e.{e1, e2, e3, e4, e5}.
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_6bit.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 6 dimentional vector i.e.{e1, e2, e3, e4, e5, e6}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
NOTE
r-oldrel-windows-x86_64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AU, CC, CG, CU, GG, GU, U}
| ^
checkRd: (-1) MMI_RNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAU, ACC, ACG, ACU, AGG, AGU, AUU, CCC, CCG, CCU, CGG, CGU, CUU, GGG, GGU, GUU and UUU}
| ^
checkRd: (-1) binary_5bit_T1.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 5 dimentional vector i.e.{e1, e2, e3, e4, e5}.
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_6bit.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 6 dimentional vector i.e.{e1, e2, e3, e4, e5, e6}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
NOTE
r-patched-linux-x86_64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AU, CC, CG, CU, GG, GU, U}
| ^
checkRd: (-1) MMI_RNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAU, ACC, ACG, ACU, AGG, AGU, AUU, CCC, CCG, CCU, CGG, CGU, CUU, GGG, GGU, GUU and UUU}
| ^
checkRd: (-1) binary_5bit_T1.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 5 dimentional vector i.e.{e1, e2, e3, e4, e5}.
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_6bit.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 6 dimentional vector i.e.{e1, e2, e3, e4, e5, e6}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
NOTE
r-release-linux-x86_64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AU, CC, CG, CU, GG, GU, U}
| ^
checkRd: (-1) MMI_RNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAU, ACC, ACG, ACU, AGG, AGU, AUU, CCC, CCG, CCU, CGG, CGU, CUU, GGG, GGU, GUU and UUU}
| ^
checkRd: (-1) binary_5bit_T1.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 5 dimentional vector i.e.{e1, e2, e3, e4, e5}.
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_6bit.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 6 dimentional vector i.e.{e1, e2, e3, e4, e5, e6}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
NOTE
r-release-macos-arm64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AU, CC, CG, CU, GG, GU, U}
| ^
checkRd: (-1) MMI_RNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAU, ACC, ACG, ACU, AGG, AGU, AUU, CCC, CCG, CCU, CGG, CGU, CUU, GGG, GGU, GUU and UUU}
| ^
checkRd: (-1) binary_5bit_T1.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 5 dimentional vector i.e.{e1, e2, e3, e4, e5}.
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_6bit.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 6 dimentional vector i.e.{e1, e2, e3, e4, e5, e6}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
NOTE
r-release-macos-x86_64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AU, CC, CG, CU, GG, GU, U}
| ^
checkRd: (-1) MMI_RNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAU, ACC, ACG, ACU, AGG, AGU, AUU, CCC, CCG, CCU, CGG, CGU, CUU, GGG, GGU, GUU and UUU}
| ^
checkRd: (-1) binary_5bit_T1.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 5 dimentional vector i.e.{e1, e2, e3, e4, e5}.
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_6bit.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 6 dimentional vector i.e.{e1, e2, e3, e4, e5, e6}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
NOTE
r-release-windows-x86_64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AU, CC, CG, CU, GG, GU, U}
| ^
checkRd: (-1) MMI_RNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAU, ACC, ACG, ACU, AGG, AGU, AUU, CCC, CCG, CCU, CGG, CGU, CUU, GGG, GGU, GUU and UUU}
| ^
checkRd: (-1) binary_5bit_T1.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 5 dimentional vector i.e.{e1, e2, e3, e4, e5}.
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_5bit_T1.Rd:41: Lost braces; missing escapes or markup?
41 | e1={G, A, V, L, M, I}, e2={F, Y, W}, e3={K, R, H}, e4={D, E}, e5={S, T, C, P, N, Q}. e1 is ecoded by 10000
| ^
checkRd: (-1) binary_6bit.Rd:40: Lost braces; missing escapes or markup?
40 | Then represent group of amino acids by a 6 dimentional vector i.e.{e1, e2, e3, e4, e5, e6}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
checkRd: (-1) binary_6bit.Rd:41: Lost braces; missing escapes or markup?
41 | e1={H, R, K}, e2={D, E, N, D}, e3={C}, e4={S, T, P, A, G}, e5={M, I, L, V}, e6={F, Y, W}.
| ^
Check History
NOTE 0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Sare Amerifar <sare.ameri.01@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Sare",
family = "Amerifar",
role = c("aut", "cre"),
email = "sare.ameri.01@gmail.com")
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Sare Amerifar <sare.ameri.01@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Sare",
family = "Amerifar",
role = c("aut", "cre"),
email = "sare.ameri.01@gmail.com")
as necessary.
NOTE
r-devel-linux-x86_64-fedora-clang
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost brac
NOTE
r-devel-linux-x86_64-fedora-gcc
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost brac
NOTE
r-devel-macos-arm64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost brac
NOTE
r-devel-windows-x86_64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost brac
NOTE
r-patched-linux-x86_64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost brac
NOTE
r-release-linux-x86_64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost brac
NOTE
r-release-macos-arm64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost brac
NOTE
r-release-macos-x86_64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost brac
NOTE
r-release-windows-x86_64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost brac
NOTE
r-oldrel-macos-arm64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost brac
NOTE
r-oldrel-macos-x86_64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost brac
NOTE
r-oldrel-windows-x86_64
Rd files
checkRd: (-1) MMI_DNA.Rd:20: Lost braces; missing escapes or markup?
20 | MMI computes mutual information based on 2-mers T2 = { AA, AC, AG, AT, CC, CG, CT, GG, GT, TT}
| ^
checkRd: (-1) MMI_DNA.Rd:21: Lost braces; missing escapes or markup?
21 | and 3-mers T3 = {AAA, AAC, AAG, AAT, ACC, ACG, ACT, AGG, AGT, ATT, CCC, CCG, CCT, CGG, CGT, CTT, GGG, GGT, GTT and TTT}
| ^
checkRd: (-1) MMI_RNA.Rd:20: Lost brac
Reverse Dependencies (4)
Dependency Network
Version History
new
2.0.0
Mar 9, 2026