fluxfixer
Advanced Framework for Sap Flow Data Post-Process
v1.0.0
·
Feb 2, 2026
·
MIT + file LICENSE
Description
Provides a flexible framework for post-processing thermal dissipation sap flow data using statistical methods and machine learning. This framework includes anomaly correction, outlier removal, gap-filling, trend removal, signal damping correction, and sap flux density calculation. The functions in this package can also apply to other time series with various artifacts.
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| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | ERROR |
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| r-release-linux-x86_64 | OK |
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r-devel-macos-arm64
tests
Running ‘testthat.R’ [81s/51s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(fluxfixer)
>
> test_check("fluxfixer")
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--- dTmax calculation by the MW and DR methods finished
--- dTmax time series aggregation started
--- dTmax time series aggregation finished
Zero-flow condition estimation finished
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.1155032912, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.1157711388, Hyperparameter set: [3, 5, 0.1]
Random forest outlier detection started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.116118315, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.1164037447, Hyperparameter set: [3, 5, 0.1]
--- Optimal hyperparameter set: [2, 5, 0.1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest outlier detection finished
Random forest-based gap-filling started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.1176580164, Hyperparameter set: [2, 5, 1]
--- MSE: 0.1187078861, Hyperparameter set: [3, 5, 1]
--- Optimal hyperparameter set: [2, 5, 1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest-based gap-filling finished
Saving _problems/test-remove_statistical_outlier-32.R
Z-score outlier detection started
--- 5 Z-score outliers were detected
--- 1 Z-score outlier was detected
--- No Z-score outlier was detected
Z-score outlier detection finished
Time series retrieval started
--- Signal damping correction was not applied
--- Detrending was not applied
Time series retrieval finished
*** Fluxfixer started running ***
Manual error value removal was not applied
Absolute limits test finished
Short-term drift correction finished
High frequency noise filtering was not applied
Z-score outlier detection started
--- 4 Z-score outliers were detected
--- No Z-score outlier was detected
Z-score outlier detection finished
Random forest outlier detection started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0738704162, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.0728236193, Hyperparameter set: [3, 5, 0.1]
--- MSE: 0.0722613642, Hyperparameter set: [4, 5, 0.1]
--- MSE: 0.0723258816, Hyperparameter set: [5, 5, 0.1]
--- MSE: 0.0727737792, Hyperparameter set: [6, 5, 0.1]
--- Optimal hyperparameter set: [4, 5, 0.1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest outlier detection finished
Reference value definition started
--- Reference average of target time series: 11.4773826234913
--- Reference standard deviation of target time series: 1.66431731873025
Reference value definition finished
Random forest-based gap-filling started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0321570222, Hyperparameter set: [2, 5, 1]
--- MSE: 0.0323715708, Hyperparameter set: [3, 5, 1]
--- MSE: 0.0327464067, Hyperparameter set: [4, 5, 1]
--- MSE: 0.0327651185, Hyperparameter set: [5, 5, 1]
--- MSE: 0.0332510679, Hyperparameter set: [6, 5, 1]
--- Optimal hyperparameter set: [2, 5, 1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest-based gap-filling finished
Time series retrieval started
--- Signal damping correction was not applied
--- Detrending finished
Time series retrieval finished
Quality-control flag determination finished
Zero-flow condition estimation started
--- dTmax calculation by the SP method started
--- dTmax calculation by the SP method finished
--- dTmax time series aggregation started
--- dTmax time series aggregation finished
Zero-flow condition estimation finished
Fd calculation process started
--- Heartwood correction was not applied
--- Fd calculation by the SP method finished
Fd calculation process finished
*** Fluxfixer finished running successfully ***
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-remove_statistical_outlier.R:32:3'): modifying short-term drifts works ──
Expected `abs(corrected[101] - 1)` < 0.1.
Actual comparison: 1000.0 >= 0.1
Difference: 999.9 >= 0
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
Error:
! Test failures.
Execution halted
OK
r-devel-windows-x86_64
*
ERROR
r-oldrel-macos-arm64
tests
Running ‘testthat.R’ [77s/48s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(fluxfixer)
>
> test_check("fluxfixer")
--- dTmax calculation by the SP method started
--- dTmax calculation by the SP method finished
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--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.1155032912, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.1157711388, Hyperparameter set: [3, 5, 0.1]
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--- Optimal hyperparameter set: [2, 5, 0.1]
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--- MSE: 0.1176580164, Hyperparameter set: [2, 5, 1]
--- MSE: 0.1187078861, Hyperparameter set: [3, 5, 1]
--- Optimal hyperparameter set: [2, 5, 1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
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Saving _problems/test-remove_statistical_outlier-32.R
Z-score outlier detection started
--- 5 Z-score outliers were detected
--- 1 Z-score outlier was detected
--- No Z-score outlier was detected
Z-score outlier detection finished
Time series retrieval started
--- Signal damping correction was not applied
--- Detrending was not applied
Time series retrieval finished
*** Fluxfixer started running ***
Manual error value removal was not applied
Absolute limits test finished
Short-term drift correction finished
High frequency noise filtering was not applied
Z-score outlier detection started
--- 4 Z-score outliers were detected
--- No Z-score outlier was detected
Z-score outlier detection finished
Random forest outlier detection started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0738599585, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.0728341783, Hyperparameter set: [3, 5, 0.1]
--- MSE: 0.0722721358, Hyperparameter set: [4, 5, 0.1]
--- MSE: 0.0723118997, Hyperparameter set: [5, 5, 0.1]
--- MSE: 0.0727282818, Hyperparameter set: [6, 5, 0.1]
--- Optimal hyperparameter set: [4, 5, 0.1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest outlier detection finished
Reference value definition started
--- Reference average of target time series: 11.4773826234913
--- Reference standard deviation of target time series: 1.66431731873025
Reference value definition finished
Random forest-based gap-filling started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0321590219, Hyperparameter set: [2, 5, 1]
--- MSE: 0.0319488318, Hyperparameter set: [3, 5, 1]
--- MSE: 0.0322191353, Hyperparameter set: [4, 5, 1]
--- MSE: 0.0324191707, Hyperparameter set: [5, 5, 1]
--- MSE: 0.032595063, Hyperparameter set: [6, 5, 1]
--- Optimal hyperparameter set: [3, 5, 1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
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Time series retrieval started
--- Signal damping correction was not applied
--- Detrending finished
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Quality-control flag determination finished
Zero-flow condition estimation started
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--- dTmax time series aggregation started
--- dTmax time series aggregation finished
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Fd calculation process started
--- Heartwood correction was not applied
--- Fd calculation by the SP method finished
Fd calculation process finished
*** Fluxfixer finished running successfully ***
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-remove_statistical_outlier.R:32:3'): modifying short-term drifts works ──
Expected `abs(corrected[101] - 1)` < 0.1.
Actual comparison: 1000.0 >= 0.1
Difference: 999.9 >= 0
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
Error:
! Test failures.
Execution halted
ERROR
r-oldrel-macos-x86_64
tests
Running ‘testthat.R’ [193s/165s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(fluxfixer)
>
> test_check("fluxfixer")
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--- dTmax calculation by the PD and ED methods finished
--- dTmax calculation by the MW and DR methods started
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--- dTmax calculation by the MW and DR methods finished
--- dTmax time series aggregation started
--- dTmax time series aggregation finished
Zero-flow condition estimation finished
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.1155032912, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.1157711388, Hyperparameter set: [3, 5, 0.1]
Random forest outlier detection started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.116118315, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.1164037447, Hyperparameter set: [3, 5, 0.1]
--- Optimal hyperparameter set: [2, 5, 0.1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest outlier detection finished
Random forest-based gap-filling started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.1176580164, Hyperparameter set: [2, 5, 1]
--- MSE: 0.1187078861, Hyperparameter set: [3, 5, 1]
--- Optimal hyperparameter set: [2, 5, 1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest-based gap-filling finished
Saving _problems/test-remove_statistical_outlier-30.R
Z-score outlier detection started
--- 5 Z-score outliers were detected
--- 1 Z-score outlier was detected
--- No Z-score outlier was detected
Z-score outlier detection finished
Time series retrieval started
--- Signal damping correction was not applied
--- Detrending was not applied
Time series retrieval finished
*** Fluxfixer started running ***
Manual error value removal was not applied
Absolute limits test finished
Short-term drift correction finished
High frequency noise filtering was not applied
Z-score outlier detection started
--- 4 Z-score outliers were detected
--- No Z-score outlier was detected
Z-score outlier detection finished
Random forest outlier detection started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0738723153, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.0728156744, Hyperparameter set: [3, 5, 0.1]
--- MSE: 0.0722560085, Hyperparameter set: [4, 5, 0.1]
--- MSE: 0.0722657316, Hyperparameter set: [5, 5, 0.1]
--- MSE: 0.072790208, Hyperparameter set: [6, 5, 0.1]
--- Optimal hyperparameter set: [4, 5, 0.1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest outlier detection finished
Reference value definition started
--- Reference average of target time series: 11.4773826234913
--- Reference standard deviation of target time series: 1.66431731873025
Reference value definition finished
Random forest-based gap-filling started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0320510997, Hyperparameter set: [2, 5, 1]
--- MSE: 0.0322984728, Hyperparameter set: [3, 5, 1]
--- MSE: 0.0323055008, Hyperparameter set: [4, 5, 1]
--- MSE: 0.0325841009, Hyperparameter set: [5, 5, 1]
--- MSE: 0.0330064573, Hyperparameter set: [6, 5, 1]
--- Optimal hyperparameter set: [2, 5, 1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest-based gap-filling finished
Time series retrieval started
--- Signal damping correction was not applied
--- Detrending finished
Time series retrieval finished
Quality-control flag determination finished
Zero-flow condition estimation started
--- dTmax calculation by the SP method started
--- dTmax calculation by the SP method finished
--- dTmax time series aggregation started
--- dTmax time series aggregation finished
Zero-flow condition estimation finished
Fd calculation process started
--- Heartwood correction was not applied
--- Fd calculation by the SP method finished
Fd calculation process finished
*** Fluxfixer finished running successfully ***
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-remove_statistical_outlier.R:28:3'): modifying short-term drifts works ──
Error in `data.frame(time = vctr_time, dT = vctr_target, dT_mod = vctr_target)`: arguments imply differing number of rows: 299, 300
Backtrace:
▆
1. └─fluxfixer::modify_short_drift(...) at test-remove_statistical_outlier.R:28:3
2. └─base::data.frame(time = vctr_time, dT = vctr_target, dT_mod = vctr_target)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
Error:
! Test failures.
Execution halted
OK
r-oldrel-windows-x86_64
*
OK
r-patched-linux-x86_64
*
OK
r-release-linux-x86_64
*
ERROR
r-release-macos-arm64
tests
Running ‘testthat.R’ [77s/49s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(fluxfixer)
>
> test_check("fluxfixer")
--- dTmax calculation by the SP method started
--- dTmax calculation by the SP method finished
--- dTmax calculation by the PD method started
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--- dTmax calculation by the PD and ED methods finished
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--- dTmax calculation by the MW and DR methods finished
Zero-flow condition estimation started
--- dTmax calculation by the SP method started
--- dTmax calculation by the SP method finished
--- dTmax calculation by the PD and ED methods started
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--- dTmax calculation by the MW and DR methods finished
--- dTmax time series aggregation started
--- dTmax time series aggregation finished
Zero-flow condition estimation finished
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.1155032912, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.1157711388, Hyperparameter set: [3, 5, 0.1]
Random forest outlier detection started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.116118315, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.1164037447, Hyperparameter set: [3, 5, 0.1]
--- Optimal hyperparameter set: [2, 5, 0.1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest outlier detection finished
Random forest-based gap-filling started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.1176580164, Hyperparameter set: [2, 5, 1]
--- MSE: 0.1187078861, Hyperparameter set: [3, 5, 1]
--- Optimal hyperparameter set: [2, 5, 1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest-based gap-filling finished
Saving _problems/test-remove_statistical_outlier-32.R
Z-score outlier detection started
--- 5 Z-score outliers were detected
--- 1 Z-score outlier was detected
--- No Z-score outlier was detected
Z-score outlier detection finished
Time series retrieval started
--- Signal damping correction was not applied
--- Detrending was not applied
Time series retrieval finished
*** Fluxfixer started running ***
Manual error value removal was not applied
Absolute limits test finished
Short-term drift correction finished
High frequency noise filtering was not applied
Z-score outlier detection started
--- 4 Z-score outliers were detected
--- No Z-score outlier was detected
Z-score outlier detection finished
Random forest outlier detection started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0738704162, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.0728236193, Hyperparameter set: [3, 5, 0.1]
--- MSE: 0.0722613642, Hyperparameter set: [4, 5, 0.1]
--- MSE: 0.0723258816, Hyperparameter set: [5, 5, 0.1]
--- MSE: 0.0727737792, Hyperparameter set: [6, 5, 0.1]
--- Optimal hyperparameter set: [4, 5, 0.1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest outlier detection finished
Reference value definition started
--- Reference average of target time series: 11.4773826234913
--- Reference standard deviation of target time series: 1.66431731873025
Reference value definition finished
Random forest-based gap-filling started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0321570222, Hyperparameter set: [2, 5, 1]
--- MSE: 0.0323715708, Hyperparameter set: [3, 5, 1]
--- MSE: 0.0327464067, Hyperparameter set: [4, 5, 1]
--- MSE: 0.0327651185, Hyperparameter set: [5, 5, 1]
--- MSE: 0.0332510679, Hyperparameter set: [6, 5, 1]
--- Optimal hyperparameter set: [2, 5, 1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
Random forest-based gap-filling finished
Time series retrieval started
--- Signal damping correction was not applied
--- Detrending finished
Time series retrieval finished
Quality-control flag determination finished
Zero-flow condition estimation started
--- dTmax calculation by the SP method started
--- dTmax calculation by the SP method finished
--- dTmax time series aggregation started
--- dTmax time series aggregation finished
Zero-flow condition estimation finished
Fd calculation process started
--- Heartwood correction was not applied
--- Fd calculation by the SP method finished
Fd calculation process finished
*** Fluxfixer finished running successfully ***
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-remove_statistical_outlier.R:32:3'): modifying short-term drifts works ──
Expected `abs(corrected[101] - 1)` < 0.1.
Actual comparison: 1000.0 >= 0.1
Difference: 999.9 >= 0
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
Error:
! Test failures.
Execution halted
ERROR
r-release-macos-x86_64
tests
Running ‘testthat.R’ [196s/169s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(fluxfixer)
>
> test_check("fluxfixer")
--- dTmax calculation by the SP method started
--- dTmax calculation by the SP method finished
--- dTmax calculation by the PD method started
|
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|
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|
|===== | 7%
|
|======= | 10%
|
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--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
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--- MSE: 0.1157711388, Hyperparameter set: [3, 5, 0.1]
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--- Optimal hyperparameter set: [2, 5, 1]
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Saving _problems/test-remove_statistical_outlier-30.R
Z-score outlier detection started
--- 5 Z-score outliers were detected
--- 1 Z-score outlier was detected
--- No Z-score outlier was detected
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Time series retrieval started
--- Signal damping correction was not applied
--- Detrending was not applied
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*** Fluxfixer started running ***
Manual error value removal was not applied
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Z-score outlier detection started
--- 4 Z-score outliers were detected
--- No Z-score outlier was detected
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--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0738723153, Hyperparameter set: [2, 5, 0.1]
--- MSE: 0.0728156744, Hyperparameter set: [3, 5, 0.1]
--- MSE: 0.0722560085, Hyperparameter set: [4, 5, 0.1]
--- MSE: 0.0722657316, Hyperparameter set: [5, 5, 0.1]
--- MSE: 0.072790208, Hyperparameter set: [6, 5, 0.1]
--- Optimal hyperparameter set: [4, 5, 0.1]
--- Hyperparameter optimization using grid search finished
--- Random forest construction started
--- Random forest construction finished
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Reference value definition started
--- Reference average of target time series: 11.4773826234913
--- Reference standard deviation of target time series: 1.66431731873025
Reference value definition finished
Random forest-based gap-filling started
--- Hyperparameter optimization using grid search started
--- MSE: Mean square error for out-of-bag data
--- Hyperparameter set: [m_try, min_nodesize, subsample]
--- MSE: 0.0320510997, Hyperparameter set: [2, 5, 1]
--- MSE: 0.0322984728, Hyperparameter set: [3, 5, 1]
--- MSE: 0.0323055008, Hyperparameter set: [4, 5, 1]
--- MSE: 0.0325841009, Hyperparameter set: [5, 5, 1]
--- MSE: 0.0330064573, Hyperparameter set: [6, 5, 1]
--- Optimal hyperparameter set: [2, 5, 1]
--- Hyperparameter optimization using grid search finished
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--- Detrending finished
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Fd calculation process started
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Fd calculation process finished
*** Fluxfixer finished running successfully ***
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-remove_statistical_outlier.R:28:3'): modifying short-term drifts works ──
Error in `data.frame(time = vctr_time, dT = vctr_target, dT_mod = vctr_target)`: arguments imply differing number of rows: 299, 300
Backtrace:
▆
1. └─fluxfixer::modify_short_drift(...) at test-remove_statistical_outlier.R:28:3
2. └─base::data.frame(time = vctr_time, dT = vctr_target, dT_mod = vctr_target)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 48 ]
Error:
! Test failures.
Execution halted
OK
r-release-windows-x86_64
*
Check History
ERROR 9 OK · 0 NOTE · 0 WARNING · 5 ERROR · 0 FAILURE Mar 9, 2026
ERROR
r-devel-macos-arm64
tests
Running ‘testthat.R’ [81s/51s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(
ERROR
r-release-macos-arm64
tests
Running ‘testthat.R’ [77s/49s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(
ERROR
r-release-macos-x86_64
tests
Running ‘testthat.R’ [196s/169s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > librar
ERROR
r-oldrel-macos-arm64
tests
Running ‘testthat.R’ [77s/48s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(
ERROR
r-oldrel-macos-x86_64
tests
Running ‘testthat.R’ [193s/165s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > librar
Dependency Network
Version History
new
1.0.0
Mar 9, 2026