Skip to content

easyEWAS

Perform and Visualize EWAS Analysis

v1.0.1 · Mar 16, 2026 · GPL (>= 3)

Description

Tools for conducting epigenome-wide association studies (EWAS) and visualizing results. Users provide sample metadata and methylation matrices to run EWAS with linear models, linear mixed-effects models, or Cox models. The package supports downstream visualization, bootstrap validation, enrichment analysis, batch effect correction, and differentially methylated region (DMR) analysis with optional parallel computing. Methods are described in Wang et al. (2025) <doi:10.1093/bioadv/vbaf026>, Johnson et al. (2007) <doi:10.1093/biostatistics/kxj037>, and Peters et al. (2015) <doi:10.1186/1756-8935-8-6>.

Downloads

445

Last 30 days

8567th

445

Last 90 days

445

Last year

CRAN Check Status

2 NOTE
12 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (2 non-OK)
NOTE r-oldrel-macos-arm64

package dependencies

Package suggested but not available for checking: ‘DMRcate’
NOTE r-oldrel-macos-x86_64

package dependencies

Package suggested but not available for checking: ‘DMRcate’

Check History

NOTE 4 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 16, 2026
NOTE r-oldrel-macos-arm64

package dependencies

Package suggested but not available for checking: ‘DMRcate’

Dependency Network

Dependencies Reverse dependencies R6 boot CMplot ddpcr doParallel dplyr foreach lmerTest magrittr readxl survival tictoc vroom withr R.utils +1 more dependencies easyEWAS

Version History

new 1.0.1 Mar 16, 2026