dynwrap

Representing and Inferring Single-Cell Trajectories

v1.2.5 · Nov 26, 2025 · MIT + file LICENSE

Description

Provides functionality to infer trajectories from single-cell data, represent them into a common format, and adapt them. Other biological information can also be added, such as cellular grouping, RNA velocity and annotation. Saelens et al. (2019) <doi:10.1038/s41587-019-0071-9>.

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CRAN Check Status

9 NOTE

5 OK

Show all 14 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	NOTE	237.1s
r-devel-linux-x86_64-debian-gcc	NOTE	149.3s
r-devel-linux-x86_64-fedora-clang	NOTE	359s
r-devel-linux-x86_64-fedora-gcc	NOTE	356.9s
r-devel-macos-arm64	OK	65s
r-devel-windows-x86_64	NOTE	227s
r-oldrel-macos-arm64	OK	58s
r-oldrel-macos-x86_64	OK	341s
r-oldrel-windows-x86_64	NOTE	296s
r-patched-linux-x86_64	NOTE	213.7s
r-release-linux-x86_64	NOTE	212.6s
r-release-macos-arm64	OK	58s
r-release-macos-x86_64	OK	328s
r-release-windows-x86_64	NOTE	222s

Check details (16 non-OK)

NOTE r-devel-linux-x86_64-debian-clang

R code for possible problems

get_ti_methods: no visible binding for global variable ‘id’
simplify_replace_edges: no visible binding for global variable ‘id’
simplify_trajectory: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id

NOTE r-devel-linux-x86_64-debian-clang

relative paths in package URLs

Found the following (possibly) invalid URLs:
  URL: ../create_ti_method_script
    From: inst/doc/create_ti_method_container.html
  URL: ../create_ti_method_container
    From: inst/doc/create_ti_method_definition.html
  URL: ../create_ti_method_wrappers
    From: inst/doc/create_ti_method_definition.html
  URL: ../create_ti_method_wrappers
    From: inst/doc/create_ti_method_r.html

NOTE r-devel-linux-x86_64-debian-gcc

R code for possible problems

get_ti_methods: no visible binding for global variable ‘id’
simplify_replace_edges: no visible binding for global variable ‘id’
simplify_trajectory: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id

NOTE r-devel-linux-x86_64-debian-gcc

relative paths in package URLs

Found the following (possibly) invalid URLs:
  URL: ../create_ti_method_script
    From: inst/doc/create_ti_method_container.html
  URL: ../create_ti_method_container
    From: inst/doc/create_ti_method_definition.html
  URL: ../create_ti_method_wrappers
    From: inst/doc/create_ti_method_definition.html
  URL: ../create_ti_method_wrappers
    From: inst/doc/create_ti_method_r.html

NOTE r-devel-linux-x86_64-fedora-clang

R code for possible problems

get_ti_methods: no visible binding for global variable ‘id’
simplify_replace_edges: no visible binding for global variable ‘id’
simplify_trajectory: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id

NOTE r-devel-linux-x86_64-fedora-gcc

R code for possible problems

get_ti_methods: no visible binding for global variable ‘id’
simplify_replace_edges: no visible binding for global variable ‘id’
simplify_trajectory: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id

OK r-devel-macos-arm64

NOTE r-devel-windows-x86_64

R code for possible problems

get_ti_methods: no visible binding for global variable 'id'
simplify_replace_edges: no visible binding for global variable 'id'
simplify_trajectory: no visible binding for global variable 'id'
Undefined global functions or variables:
  id

OK r-oldrel-macos-arm64

OK r-oldrel-macos-x86_64

NOTE r-oldrel-windows-x86_64

R code for possible problems

get_ti_methods: no visible binding for global variable 'id'
simplify_replace_edges: no visible binding for global variable 'id'
simplify_trajectory: no visible binding for global variable 'id'
Undefined global functions or variables:
  id

NOTE r-patched-linux-x86_64

R code for possible problems

get_ti_methods: no visible binding for global variable ‘id’
simplify_replace_edges: no visible binding for global variable ‘id’
simplify_trajectory: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id

NOTE r-release-linux-x86_64

R code for possible problems

get_ti_methods: no visible binding for global variable ‘id’
simplify_replace_edges: no visible binding for global variable ‘id’
simplify_trajectory: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id

OK r-release-macos-arm64

OK r-release-macos-x86_64

NOTE r-release-windows-x86_64

R code for possible problems

get_ti_methods: no visible binding for global variable 'id'
simplify_replace_edges: no visible binding for global variable 'id'
simplify_trajectory: no visible binding for global variable 'id'
Undefined global functions or variables:
  id

Check History

NOTE 5 OK · 9 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026

NOTE r-devel-linux-x86_64-debian-clang

R code for possible problems

get_ti_methods: no visible binding for global variable ‘id’
simplify_replace_edges: no visible binding for global variable ‘id’
simplify_trajectory: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id

NOTE r-devel-linux-x86_64-debian-gcc

R code for possible problems

get_ti_methods: no visible binding for global variable ‘id’
simplify_replace_edges: no visible binding for global variable ‘id’
simplify_trajectory: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id

NOTE r-devel-linux-x86_64-fedora-clang

R code for possible problems

get_ti_methods: no visible binding for global variable ‘id’
simplify_replace_edges: no visible binding for global variable ‘id’
simplify_trajectory: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id

NOTE r-devel-linux-x86_64-fedora-gcc

R code for possible problems

get_ti_methods: no visible binding for global variable ‘id’
simplify_replace_edges: no visible binding for global variable ‘id’
simplify_trajectory: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id

NOTE r-devel-windows-x86_64

R code for possible problems

get_ti_methods: no visible binding for global variable 'id'
simplify_replace_edges: no visible binding for global variable 'id'
simplify_trajectory: no visible binding for global variable 'id'
Undefined global functions or variables:
  id

NOTE r-patched-linux-x86_64

R code for possible problems

get_ti_methods: no visible binding for global variable ‘id’
simplify_replace_edges: no visible binding for global variable ‘id’
simplify_trajectory: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id

NOTE r-release-linux-x86_64

R code for possible problems

get_ti_methods: no visible binding for global variable ‘id’
simplify_replace_edges: no visible binding for global variable ‘id’
simplify_trajectory: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id

NOTE r-release-windows-x86_64

R code for possible problems

get_ti_methods: no visible binding for global variable 'id'
simplify_replace_edges: no visible binding for global variable 'id'
simplify_trajectory: no visible binding for global variable 'id'
Undefined global functions or variables:
  id

NOTE r-oldrel-windows-x86_64

R code for possible problems

get_ti_methods: no visible binding for global variable 'id'
simplify_replace_edges: no visible binding for global variable 'id'
simplify_trajectory: no visible binding for global variable 'id'
Undefined global functions or variables:
  id

dynwrap

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