causalPAF

Causal Effect for Population Attributable Fractions (PAF)

v1.2.5 · Aug 19, 2022 · GPL (>= 2)

Description

Calculates population attributable fraction causal effects. The 'causalPAF' package contains a suite of functions for causal analysis calculations of population attributable fractions (PAF) given a causal diagram which apply both: Pathway-specific population attributable fractions (PS-PAFs) O’Connell and Ferguson (2022) <doi:10.1093/ije/dyac079> and Sequential population attributable fractions Ferguson, O’Connell, and O’Donnell (2020) <doi:10.1186/s13690-020-00442-x>. Results are presentable in both table and plot format.

Downloads

191

Last 30 days

17515th

415

Last 90 days

415

Last year

Trend: -14.7% (30d vs prior 30d)

CRAN Check Status

14 NOTE

Show all 14 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	NOTE	97.2s
r-devel-linux-x86_64-debian-gcc	NOTE	67.2s
r-devel-linux-x86_64-fedora-clang	NOTE	152.3s
r-devel-linux-x86_64-fedora-gcc	NOTE	147.3s
r-devel-macos-arm64	NOTE	24s
r-devel-windows-x86_64	NOTE	103s
r-oldrel-macos-arm64	NOTE
r-oldrel-macos-x86_64	NOTE	57s
r-oldrel-windows-x86_64	NOTE	135s
r-patched-linux-x86_64	NOTE	87.7s
r-release-linux-x86_64	NOTE	87.5s
r-release-macos-arm64	NOTE
r-release-macos-x86_64	NOTE	68s
r-release-windows-x86_64	NOTE	101s

Check details (14 non-OK)

NOTE r-devel-linux-x86_64-debian-clang

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) indirect_PAF_Sjolander_onesimulation.Rd:65: Lost braces; missing escapes or markup?
    65 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) path_specific_onesimulation.Rd:54: Lost braces; missing escapes or markup?
    54 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) strokedata.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Preclinical diabetes}.
       |                   ^
checkRd: (-1) strokedata.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^
checkRd: (-1) strokedata_smallSample.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata_smallSample.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata_smallSample.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Pre clinical diabetes}.
       |                   ^
checkRd: (-1) strokedata_smallSample.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^

NOTE r-devel-linux-x86_64-debian-gcc

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) indirect_PAF_Sjolander_onesimulation.Rd:65: Lost braces; missing escapes or markup?
    65 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) path_specific_onesimulation.Rd:54: Lost braces; missing escapes or markup?
    54 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) strokedata.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Preclinical diabetes}.
       |                   ^
checkRd: (-1) strokedata.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^
checkRd: (-1) strokedata_smallSample.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata_smallSample.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata_smallSample.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Pre clinical diabetes}.
       |                   ^
checkRd: (-1) strokedata_smallSample.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^

NOTE r-devel-linux-x86_64-fedora-clang

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) indirect_PAF_Sjolander_onesimulation.Rd:65: Lost braces; missing escapes or markup?
    65 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) path_specific_onesimulation.Rd:54: Lost braces; missing escapes or markup?
    54 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) strokedata.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Preclinical diabetes}.
       |                   ^
checkRd: (-1) strokedata.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^
checkRd: (-1) strokedata_smallSample.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata_smallSample.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata_smallSample.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Pre clinical diabetes}.
       |                   ^
checkRd: (-1) strokedata_smallSample.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^

NOTE r-devel-linux-x86_64-fedora-gcc

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) indirect_PAF_Sjolander_onesimulation.Rd:65: Lost braces; missing escapes or markup?
    65 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) path_specific_onesimulation.Rd:54: Lost braces; missing escapes or markup?
    54 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) strokedata.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Preclinical diabetes}.
       |                   ^
checkRd: (-1) strokedata.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^
checkRd: (-1) strokedata_smallSample.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata_smallSample.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata_smallSample.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Pre clinical diabetes}.
       |                   ^
checkRd: (-1) strokedata_smallSample.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^

NOTE r-devel-macos-arm64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) indirect_PAF_Sjolander_onesimulation.Rd:65: Lost braces; missing escapes or markup?
    65 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) path_specific_onesimulation.Rd:54: Lost braces; missing escapes or markup?
    54 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) strokedata.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Preclinical diabetes}.
       |                   ^
checkRd: (-1) strokedata.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^
checkRd: (-1) strokedata_smallSample.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata_smallSample.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata_smallSample.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Pre clinical diabetes}.
       |                   ^
checkRd: (-1) strokedata_smallSample.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^

NOTE r-devel-windows-x86_64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) indirect_PAF_Sjolander_onesimulation.Rd:65: Lost braces; missing escapes or markup?
    65 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) path_specific_onesimulation.Rd:54: Lost braces; missing escapes or markup?
    54 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) strokedata.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Preclinical diabetes}.
       |                   ^
checkRd: (-1) strokedata.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^
checkRd: (-1) strokedata_smallSample.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata_smallSample.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata_smallSample.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Pre clinical diabetes}.
       |                   ^
checkRd: (-1) strokedata_smallSample.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^

NOTE r-oldrel-macos-arm64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) indirect_PAF_Sjolander_onesimulation.Rd:65: Lost braces; missing escapes or markup?
    65 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) path_specific_onesimulation.Rd:54: Lost braces; missing escapes or markup?
    54 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) strokedata.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Preclinical diabetes}.
       |                   ^
checkRd: (-1) strokedata.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^
checkRd: (-1) strokedata_smallSample.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata_smallSample.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata_smallSample.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Pre clinical diabetes}.
       |                   ^
checkRd: (-1) strokedata_smallSample.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^

NOTE r-oldrel-macos-x86_64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) indirect_PAF_Sjolander_onesimulation.Rd:65: Lost braces; missing escapes or markup?
    65 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) path_specific_onesimulation.Rd:54: Lost braces; missing escapes or markup?
    54 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) strokedata.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Preclinical diabetes}.
       |                   ^
checkRd: (-1) strokedata.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^
checkRd: (-1) strokedata_smallSample.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata_smallSample.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata_smallSample.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Pre clinical diabetes}.
       |                   ^
checkRd: (-1) strokedata_smallSample.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^

NOTE r-oldrel-windows-x86_64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) indirect_PAF_Sjolander_onesimulation.Rd:65: Lost braces; missing escapes or markup?
    65 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) path_specific_onesimulation.Rd:54: Lost braces; missing escapes or markup?
    54 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) strokedata.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Preclinical diabetes}.
       |                   ^
checkRd: (-1) strokedata.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^
checkRd: (-1) strokedata_smallSample.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata_smallSample.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata_smallSample.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Pre clinical diabetes}.
       |                   ^
checkRd: (-1) strokedata_smallSample.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^

NOTE r-patched-linux-x86_64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) indirect_PAF_Sjolander_onesimulation.Rd:65: Lost braces; missing escapes or markup?
    65 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) path_specific_onesimulation.Rd:54: Lost braces; missing escapes or markup?
    54 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) strokedata.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Preclinical diabetes}.
       |                   ^
checkRd: (-1) strokedata.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^
checkRd: (-1) strokedata_smallSample.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata_smallSample.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata_smallSample.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Pre clinical diabetes}.
       |                   ^
checkRd: (-1) strokedata_smallSample.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^

NOTE r-release-linux-x86_64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) indirect_PAF_Sjolander_onesimulation.Rd:65: Lost braces; missing escapes or markup?
    65 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) path_specific_onesimulation.Rd:54: Lost braces; missing escapes or markup?
    54 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) strokedata.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Preclinical diabetes}.
       |                   ^
checkRd: (-1) strokedata.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^
checkRd: (-1) strokedata_smallSample.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata_smallSample.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata_smallSample.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Pre clinical diabetes}.
       |                   ^
checkRd: (-1) strokedata_smallSample.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^

NOTE r-release-macos-arm64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) indirect_PAF_Sjolander_onesimulation.Rd:65: Lost braces; missing escapes or markup?
    65 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) path_specific_onesimulation.Rd:54: Lost braces; missing escapes or markup?
    54 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) strokedata.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Preclinical diabetes}.
       |                   ^
checkRd: (-1) strokedata.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^
checkRd: (-1) strokedata_smallSample.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata_smallSample.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata_smallSample.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Pre clinical diabetes}.
       |                   ^
checkRd: (-1) strokedata_smallSample.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^

NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) indirect_PAF_Sjolander_onesimulation.Rd:65: Lost braces; missing escapes or markup?
    65 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) path_specific_onesimulation.Rd:54: Lost braces; missing escapes or markup?
    54 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) strokedata.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Preclinical diabetes}.
       |                   ^
checkRd: (-1) strokedata.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^
checkRd: (-1) strokedata_smallSample.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata_smallSample.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata_smallSample.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Pre clinical diabetes}.
       |                   ^
checkRd: (-1) strokedata_smallSample.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^

NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) indirect_PAF_Sjolander_onesimulation.Rd:65: Lost braces; missing escapes or markup?
    65 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) path_specific_onesimulation.Rd:54: Lost braces; missing escapes or markup?
    54 | \if{html}{\figure{CausalDAG.jpg} {options: width=100 alt="Causal Bayesian network DAG"} }
       |                                  ^
checkRd: (-1) strokedata.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Preclinical diabetes}.
       |                   ^
checkRd: (-1) strokedata.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^
checkRd: (-1) strokedata_smallSample.Rd:49: Lost braces; missing escapes or markup?
    49 |              individual’s behaviour SB = {Smoking, Alcohol intake, inactivity, diet and stress},
       |                                          ^
checkRd: (-1) strokedata_smallSample.Rd:50: Lost braces; missing escapes or markup?
    50 |              their physiology SP = {High blood pressure, ApoB/ApoA ratio, Waist hip ratio}
       |                                    ^
checkRd: (-1) strokedata_smallSample.Rd:52: Lost braces; missing escapes or markup?
    52 |              SD = {Cardiac risk factors, Pre clinical diabetes}.
       |                   ^
checkRd: (-1) strokedata_smallSample.Rd:60: Lost braces; missing escapes or markup?
    60 |              {SC , SB , SP , SD , Y }, and summarized by the causal graphs in
       |              ^

Check History

NOTE 0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026

NOTE r-devel-linux-x86_64-debian-clang

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval

NOTE r-devel-linux-x86_64-debian-gcc

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval

NOTE r-devel-linux-x86_64-fedora-clang

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval

NOTE r-devel-linux-x86_64-fedora-gcc

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval

NOTE r-devel-macos-arm64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval

NOTE r-devel-windows-x86_64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval

NOTE r-patched-linux-x86_64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval

NOTE r-release-linux-x86_64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval

NOTE r-release-macos-arm64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval

NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval

NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval

NOTE r-oldrel-macos-arm64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval

NOTE r-oldrel-macos-x86_64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval

NOTE r-oldrel-windows-x86_64

Rd files

checkRd: (-1) eval_make_DAG.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_DAG.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval_make_formula.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) eval

Dependency Network

Version History

new 1.2.5 Mar 9, 2026

Maintainer

Maurice O'Connell

Dependencies

Depends

R (>= 2.10)

Imports

checkmate dagitty dplyr forestplot ggdag ggplot2 grid gridExtra magrittr MASS reshape2 rlist splines stats utils

Suggests

spelling

Compilation

No compilation needed

First Published

Mar 9, 2026

RSS Feed

CRAN Checks

View on CRAN →