Description
Functions to perform the following analyses: i) inferring epistasis from RNAi double knockdown data; ii) identifying gene pairs of multiple mutation patterns; iii) assessing association between gene pairs and survival; and iv) calculating the smallworldness of a graph (e.g., a gene interaction network). Data and analyses are described in Wang, X., Fu, A. Q., McNerney, M. and White, K. P. (2014). Widespread genetic epistasis among breast cancer genes. Nature Communications. 5 4828. <doi:10.1038/ncomms5828>.
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| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (14 non-OK)
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r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Audrey Q. Fu <audreyqyfu@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Audrey", "Qiuyan"),
family = "Fu",
role = "aut"),
person(given = "Xiaoyue",
family = "Wang",
role = "aut"),
person(given = c("Audrey", "Q."),
family = "Fu",
role = "cre",
email = "audreyqyfu@gmail.com"))
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Audrey Q. Fu <audreyqyfu@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Audrey", "Qiuyan"),
family = "Fu",
role = "aut"),
person(given = "Xiaoyue",
family = "Wang",
role = "aut"),
person(given = c("Audrey", "Q."),
family = "Fu",
role = "cre",
email = "audreyqyfu@gmail.com"))
as necessary.
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r-devel-linux-x86_64-fedora-gcc
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r-devel-macos-arm64
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r-devel-windows-x86_64
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r-oldrel-macos-arm64
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r-oldrel-macos-x86_64
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r-oldrel-windows-x86_64
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r-patched-linux-x86_64
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r-release-linux-x86_64
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Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Audrey Q. Fu <audreyqyfu@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Audrey", "Qiuyan"),
family = "Fu",
role = "aut"),
person(given = "Xiaoyue",
family = "Wang",
role = "aut"),
person(given = c("Audrey", "Q."),
family = "Fu",
role = "cre",
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Audrey Q. Fu <audreyqyfu@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Audrey", "Qiuyan"),
family = "Fu",
role = "aut"),
person(given = "Xiaoyue",
family = "Wang",
role = "aut"),
person(given = c("Audrey", "Q."),
family = "Fu",
role = "cre",
Dependency Network
Version History
new
1.0.1
Mar 10, 2026