Description
A computationally-efficient leading-eigenvalue approximation to tail probabilities and quantiles of large quadratic forms, in particular for the Sequence Kernel Association Test (SKAT) used in genomics <doi:10.1002/gepi.22136>. Also provides stochastic singular value decomposition for dense or sparse matrices.
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| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | NOTE |
| r-devel-linux-x86_64-fedora-gcc | NOTE |
| r-devel-macos-arm64 | NOTE |
| r-devel-windows-x86_64 | NOTE |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | NOTE |
| r-patched-linux-x86_64 | NOTE |
| r-release-linux-x86_64 | NOTE |
| r-release-macos-arm64 | NOTE |
| r-release-macos-x86_64 | NOTE |
| r-release-windows-x86_64 | NOTE |
Check details (16 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Thomas Lumley <t.lumley@auckland.ac.nz>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Thomas",
family = "Lumley",
role = c("aut", "cre"),
email = "t.lumley@auckland.ac.nz")
as necessary.
NOTE
r-devel-linux-x86_64-debian-clang
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
| ^
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Thomas Lumley <t.lumley@auckland.ac.nz>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Thomas",
family = "Lumley",
role = c("aut", "cre"),
email = "t.lumley@auckland.ac.nz")
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
| ^
NOTE
r-devel-linux-x86_64-fedora-clang
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
| ^
NOTE
r-devel-linux-x86_64-fedora-gcc
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
| ^
NOTE
r-devel-macos-arm64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
| ^
NOTE
r-devel-windows-x86_64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
| ^
NOTE
r-oldrel-macos-arm64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
| ^
NOTE
r-oldrel-macos-x86_64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
| ^
NOTE
r-oldrel-windows-x86_64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
| ^
NOTE
r-patched-linux-x86_64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
| ^
NOTE
r-release-linux-x86_64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
| ^
NOTE
r-release-macos-arm64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
| ^
NOTE
r-release-macos-x86_64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
| ^
NOTE
r-release-windows-x86_64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
| ^
Check History
NOTE 0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Thomas Lumley <t.lumley@auckland.ac.nz>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Thomas",
family = "Lumley",
role = c("aut", "cre"),
email = "t.lumley@auckland.ac.nz")
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Thomas Lumley <t.lumley@auckland.ac.nz>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Thomas",
family = "Lumley",
role = c("aut", "cre"),
email = "t.lumley@auckland.ac.nz")
as necessary.
NOTE
r-devel-linux-x86_64-fedora-clang
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
|
NOTE
r-devel-linux-x86_64-fedora-gcc
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
|
NOTE
r-devel-macos-arm64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
|
NOTE
r-devel-windows-x86_64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
|
NOTE
r-patched-linux-x86_64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
|
NOTE
r-release-linux-x86_64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
|
NOTE
r-release-macos-arm64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
|
NOTE
r-release-macos-x86_64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
|
NOTE
r-release-windows-x86_64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
|
NOTE
r-oldrel-macos-arm64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
|
NOTE
r-oldrel-macos-x86_64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
|
NOTE
r-oldrel-windows-x86_64
Rd files
checkRd: (-1) pQF.Rd:30: Lost braces; missing escapes or markup?
30 | When \code{M} is not square, a randomised estimator for the trace of \code{crossprod(M)^2} is used. This is the sample size. When \code{M} is of \code{"matrixfree"} and does not include the trace of {crossprod(M)} as a component, this sample size will also be used to compute that. See Hutchinson reference. }
|
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Version History
new
1.6
Mar 9, 2026