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attrib

Attributable Burden of Disease

v2021.1.2 · Mar 30, 2021 · MIT + file LICENSE

Description

Provides functions for estimating the attributable burden of disease due to risk factors. The posterior simulation is performed using arm::sim as described in Gelman, Hill (2012) <doi:10.1017/CBO9780511790942> and the attributable burden method is based on Nielsen, Krause, Molbak <doi:10.1111/irv.12564>.

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CRAN Check Status

1 ERROR
2 NOTE
11 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang NOTE
r-devel-linux-x86_64-fedora-gcc NOTE
r-devel-macos-arm64 OK
r-devel-windows-x86_64 ERROR
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (14 non-OK)
OK r-devel-linux-x86_64-debian-clang

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OK r-devel-linux-x86_64-debian-gcc

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NOTE r-devel-linux-x86_64-fedora-clang

dependencies in R code

Namespaces in Imports field not imported from:
  ‘dlnm’ ‘ggplot2’ ‘mvmeta’ ‘pbs’ ‘tsModel’
  All declared Imports should be used.
NOTE r-devel-linux-x86_64-fedora-gcc

dependencies in R code

Namespaces in Imports field not imported from:
  ‘dlnm’ ‘ggplot2’ ‘mvmeta’ ‘pbs’ ‘tsModel’
  All declared Imports should be used.
OK r-devel-macos-arm64

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ERROR r-devel-windows-x86_64

tests

  Running 'testthat.R' [70s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(attrib)
  attrib 2021.1.2 https://folkehelseinstituttet.github.io/attrib
  > 
  > test_check("attrib")
  
    |                                                                            
    |                                                                      |   0%
    |                                                                            
    |===================================                                   |  50%
    |                                                                            
    |======================================================================| 100%Saving _problems/test_fake-162.R
  Saving _problems/test_fake-170.R
  [ FAIL 2 | WARN 0 | SKIP 0 | PASS 6 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test_fake.R:159:3'): simmulations ─────────────────────────────────
  Expected `round(as.numeric(median(dif_obs), 0))` to equal `c(0)`.
  Differences:
  1/1 mismatches
  [1] -1 - 0 == -1
  ── Failure ('test_fake.R:167:3'): simmulations ─────────────────────────────────
  Expected `round(as.numeric(median(dif), 0))` to equal `c(0)`.
  Differences:
  1/1 mismatches
  [1] -1 - 0 == -1
  
  [ FAIL 2 | WARN 0 | SKIP 0 | PASS 6 ]
  Error:
  ! Test failures.
  Execution halted
OK r-oldrel-macos-arm64

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OK r-oldrel-macos-x86_64

*


            
OK r-oldrel-windows-x86_64

*


            
OK r-patched-linux-x86_64

*


            
OK r-release-linux-x86_64

*


            
OK r-release-macos-arm64

*


            
OK r-release-macos-x86_64

*


            
OK r-release-windows-x86_64

*


            

Check History

ERROR 11 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-devel-linux-x86_64-fedora-clang

dependencies in R code

Namespaces in Imports field not imported from:
  ‘dlnm’ ‘ggplot2’ ‘mvmeta’ ‘pbs’ ‘tsModel’
  All declared Imports should be used.
NOTE r-devel-linux-x86_64-fedora-gcc

dependencies in R code

Namespaces in Imports field not imported from:
  ‘dlnm’ ‘ggplot2’ ‘mvmeta’ ‘pbs’ ‘tsModel’
  All declared Imports should be used.
ERROR r-devel-windows-x86_64

tests

  Running 'testthat.R' [70s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(attrib)
  attrib 2021.1.2 https://folkehelseinstituttet.github.io/attrib
  > 
  > test_check("attrib")
  
    |                                                                            
    |                                                                      |   0%
    |                                                                            
    |===============

Dependency Network

Dependencies Reverse dependencies data.table magrittr glue pbs dlnm lubridate mvmeta tsModel lme4 arm tibble stringr ggplot2 progress attrib

Version History

new 2021.1.2 Mar 9, 2026