Skip to content

aroma.affymetrix

Analysis of Large Affymetrix Microarray Data Sets

v3.2.3 · Aug 19, 2025 · LGPL (>= 2.1)

Description

A cross-platform R framework that facilitates processing of any number of Affymetrix microarray samples regardless of computer system. The only parameter that limits the number of chips that can be processed is the amount of available disk space. The Aroma Framework has successfully been used in studies to process tens of thousands of arrays. This package has actively been used since 2006.

Downloads

725

Last 30 days

4857th

1.3K

Last 90 days

1.3K

Last year

Trend: +21.9% (30d vs prior 30d)

CRAN Check Status

3 NOTE
11 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 NOTE
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (16 non-OK)
OK r-devel-linux-x86_64-debian-clang

*


            
OK r-devel-linux-x86_64-debian-gcc

*


            
OK r-devel-linux-x86_64-fedora-clang

*


            
OK r-devel-linux-x86_64-fedora-gcc

*


            
OK r-devel-macos-arm64

*


            
OK r-devel-windows-x86_64

*


            
NOTE r-oldrel-macos-arm64

installed package size

  installed size is  6.2Mb
  sub-directories of 1Mb or more:
    R             3.1Mb
    help          1.1Mb
    testScripts   1.1Mb
NOTE r-oldrel-macos-arm64

package dependencies

Package suggested but not available for checking: ‘AffymetrixDataTestFiles’
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  6.2Mb
  sub-directories of 1Mb or more:
    R             3.1Mb
    help          1.2Mb
    testScripts   1.1Mb
NOTE r-oldrel-macos-x86_64

package dependencies

Package suggested but not available for checking: ‘AffymetrixDataTestFiles’
NOTE r-oldrel-windows-x86_64

installed package size

  installed size is  5.3Mb
  sub-directories of 1Mb or more:
    R      2.3Mb
    help   1.2Mb
OK r-patched-linux-x86_64

*


            
OK r-release-linux-x86_64

*


            
OK r-release-macos-arm64

*


            
OK r-release-macos-x86_64

*


            
OK r-release-windows-x86_64

*


            

Check History

NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-oldrel-macos-arm64

package dependencies

Package suggested but not available for checking: ‘AffymetrixDataTestFiles’
NOTE r-oldrel-macos-x86_64

package dependencies

Package suggested but not available for checking: ‘AffymetrixDataTestFiles’
NOTE r-oldrel-windows-x86_64

installed package size

  installed size is  5.3Mb
  sub-directories of 1Mb or more:
    R      2.3Mb
    help   1.2Mb

Reverse Dependencies (1)

depends

Dependency Network

Dependencies Reverse dependencies R.utils aroma.core R.methodsS3 R.oo R.cache (>= 0.14.0) R.devices R.filesets aroma.apd MASS matrixStats listenv future ACNE aroma.affymetrix

Version History

new 3.2.3 Mar 9, 2026