abdiv
Alpha and Beta Diversity Measures
v0.2.0
·
Jan 20, 2020
·
MIT + file LICENSE
Description
A collection of measures for measuring ecological diversity. Ecological diversity comes in two flavors: alpha diversity measures the diversity within a single site or sample, and beta diversity measures the diversity across two sites or samples. This package overlaps considerably with other R packages such as 'vegan', 'gUniFrac', 'betapart', and 'fossil'. We also include a wide range of functions that are implemented in software outside the R ecosystem, such as 'scipy', 'Mothur', and 'scikit-bio'. The implementations here are designed to be basic and clear to the reader.
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| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (14 non-OK)
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r-devel-macos-arm64
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r-oldrel-macos-arm64
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r-oldrel-macos-x86_64
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r-oldrel-windows-x86_64
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r-patched-linux-x86_64
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r-release-linux-x86_64
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r-release-macos-arm64
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r-release-macos-x86_64
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r-release-windows-x86_64
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Changelog
Full NEWS →v0.2.0
# abdiv 0.2.0
• First CRAN release.
• Added many new functions.
• Documented and tested everything.
• Wrote a long README.
Notes on correspondence between this implementation and other software can be
found in comments at the bottom of R/alpha.R and R/beta.R.
• First CRAN release.
• Added many new functions.
• Documented and tested everything.
• Wrote a long README.
Notes on correspondence between this implementation and other software can be
found in comments at the bottom of R/alpha.R and R/beta.R.
Check History
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
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0.2.0
Mar 10, 2026