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WormTensor

A Clustering Method for Time-Series Whole-Brain Activity Data of 'C. elegans'

v0.1.2 · Jul 21, 2025 · MIT + file LICENSE

Description

A toolkit to detect clusters from distance matrices. The distance matrices are assumed to be calculated between the cells of multiple animals ('Caenorhabditis elegans') from input time-series matrices. Some functions for generating distance matrices, performing clustering, evaluating the clustering, and visualizing the results of clustering and evaluation are available. We're also providing the download function to retrieve the calculated distance matrices from 'figshare' <https://figshare.com>.

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OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026

Dependency Network

Dependencies Reverse dependencies rTensor usedist dtwclust clusterSim clValid aricode cluster ggplot2 Rtsne uwot factoextra ggrepel cowplot WormTensor

Version History

new 0.1.2 Mar 9, 2026