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ViroReportR

Respiratory Viral Infection Forecast Reporting

v1.0.4 · Feb 17, 2026 · GPL (>= 3)

Description

Tools for reporting and forecasting viral respiratory infections, using case surveillance data. Report generation tools for short-term forecasts, and validation metrics for an arbitrary number of customizable respiratory viruses. Estimation of the effective reproduction number is based on the 'EpiEstim' framework described in work by 'Cori' and colleagues. (2013) <doi:10.1093/aje/kwt133>.

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r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (14 non-OK)
OK r-devel-linux-x86_64-debian-clang

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OK r-devel-linux-x86_64-debian-gcc

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OK r-devel-linux-x86_64-fedora-clang

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OK r-devel-macos-arm64

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OK r-devel-windows-x86_64

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OK r-oldrel-macos-arm64

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OK r-oldrel-macos-x86_64

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OK r-oldrel-windows-x86_64

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OK r-patched-linux-x86_64

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OK r-release-linux-x86_64

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OK r-release-macos-arm64

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OK r-release-macos-x86_64

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OK r-release-windows-x86_64

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Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026

Dependency Network

Dependencies Reverse dependencies data.table dplyr EpiEstim ggplot2 incidence lubridate projections purrr rlang tibble tidyr glue mgcv kableExtra cowplot ViroReportR

Version History

new 1.0.4 Mar 9, 2026