TSDFGS
Training Set Determination for Genomic Selection
v2.0
·
Jun 7, 2022
·
GPL (>= 3)
Description
We propose an optimality criterion to determine the required training set, r-score, which is derived directly from Pearson's correlation between the genomic estimated breeding values and phenotypic values of the test set <doi:10.1007/s00122-019-03387-0>. This package provides two main functions to determine a good training set and its size.
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| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (14 non-OK)
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r-devel-linux-x86_64-debian-clang
*
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r-devel-linux-x86_64-debian-gcc
*
OK
r-devel-linux-x86_64-fedora-clang
*
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r-devel-linux-x86_64-fedora-gcc
*
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r-devel-macos-arm64
*
OK
r-devel-windows-x86_64
*
NOTE
r-oldrel-macos-arm64
installed package size
installed size is 16.8Mb
sub-directories of 1Mb or more:
data 1.2Mb
libs 15.4Mb
NOTE
r-oldrel-macos-x86_64
installed package size
installed size is 16.9Mb
sub-directories of 1Mb or more:
data 1.2Mb
libs 15.6Mb
OK
r-oldrel-windows-x86_64
*
OK
r-patched-linux-x86_64
*
OK
r-release-linux-x86_64
*
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r-release-macos-arm64
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r-release-macos-x86_64
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r-release-windows-x86_64
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Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE
r-oldrel-macos-arm64
installed package size
installed size is 16.8Mb
sub-directories of 1Mb or more:
data 1.2Mb
libs 15.4Mb
NOTE
r-oldrel-macos-x86_64
installed package size
installed size is 16.9Mb
sub-directories of 1Mb or more:
data 1.2Mb
libs 15.6Mb
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Version History
new
2.0
Mar 9, 2026