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StratifiedMedicine

Stratified Medicine

v1.0.5 · Mar 29, 2022 · GPL-3

Description

A toolkit for stratified medicine, subgroup identification, and precision medicine. Current tools include (1) filtering models (reduce covariate space), (2) patient-level estimate models (counterfactual patient-level quantities, such as the conditional average treatment effect), (3) subgroup identification models (find subsets of patients with similar treatment effects), and (4) treatment effect estimation and inference (for the overall population and discovered subgroups). These tools can be customized and are directly used in PRISM (patient response identifiers for stratified medicine; Jemielita and Mehrotra 2019 <arXiv:1912.03337>. This package is in beta and will be continually updated.

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CRAN Check Status

11 NOTE
3 OK
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r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang NOTE
r-devel-linux-x86_64-fedora-gcc NOTE
r-devel-macos-arm64 OK
r-devel-windows-x86_64 NOTE
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 NOTE
r-patched-linux-x86_64 NOTE
r-release-linux-x86_64 NOTE
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 NOTE
Check details (17 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Thomas Jemielita <thomasjemielita@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thomas",
                    family = "Jemielita",
                    role = c("aut", "cre"),
                    email = "thomasjemielita@gmail.com")
as necessary.

The Description field contains
  2019 <arXiv:1912.03337>. This package is in beta and will be
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE r-devel-linux-x86_64-debian-clang

R code for possible problems

plot_ple: no visible binding for global variable ‘id’
plot_tree: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Thomas Jemielita <thomasjemielita@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thomas",
                    family = "Jemielita",
                    role = c("aut", "cre"),
                    email = "thomasjemielita@gmail.com")
as necessary.

The Description field contains
  2019 <arXiv:1912.03337>. This package is in beta and will be
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE r-devel-linux-x86_64-debian-gcc

R code for possible problems

plot_ple: no visible binding for global variable ‘id’
plot_tree: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id
NOTE r-devel-linux-x86_64-fedora-clang

R code for possible problems

plot_ple: no visible binding for global variable ‘id’
plot_tree: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id
NOTE r-devel-linux-x86_64-fedora-gcc

R code for possible problems

plot_ple: no visible binding for global variable ‘id’
plot_tree: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id
OK r-devel-macos-arm64

*


            
NOTE r-devel-windows-x86_64

R code for possible problems

plot_ple: no visible binding for global variable 'id'
plot_tree: no visible binding for global variable 'id'
Undefined global functions or variables:
  id
NOTE r-oldrel-macos-arm64

installed package size

  installed size is  5.7Mb
  sub-directories of 1Mb or more:
    doc   5.0Mb
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  5.7Mb
  sub-directories of 1Mb or more:
    doc   5.0Mb
NOTE r-oldrel-windows-x86_64

R code for possible problems

plot_ple: no visible binding for global variable 'id'
plot_tree: no visible binding for global variable 'id'
Undefined global functions or variables:
  id
NOTE r-oldrel-windows-x86_64

installed package size

  installed size is  5.7Mb
  sub-directories of 1Mb or more:
    doc   5.0Mb
NOTE r-patched-linux-x86_64

R code for possible problems

plot_ple: no visible binding for global variable ‘id’
plot_tree: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id
NOTE r-release-linux-x86_64

R code for possible problems

plot_ple: no visible binding for global variable ‘id’
plot_tree: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id
OK r-release-macos-arm64

*


            
OK r-release-macos-x86_64

*


            
NOTE r-release-windows-x86_64

R code for possible problems

plot_ple: no visible binding for global variable 'id'
plot_tree: no visible binding for global variable 'id'
Undefined global functions or variables:
  id

Check History

NOTE 3 OK · 11 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Thomas Jemielita <thomasjemielita@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thomas",
                    family = "Jemielita",
                    role = c("aut", "cre"),
                    email = "thomasjemielita@gmail.com")
as necessary.

The Description field contains
  2019 <arXiv:1912.03337>. This package is in beta and will be
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Thomas Jemielita <thomasjemielita@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Thomas",
                    family = "Jemielita",
                    role = c("aut", "cre"),
                    email = "thomasjemielita@gmail.com")
as necessary.

The Description field contains
  2019 <arXiv:1912.03337>. This package is in beta and will be
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE r-devel-linux-x86_64-fedora-clang

R code for possible problems

plot_ple: no visible binding for global variable ‘id’
plot_tree: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id
NOTE r-devel-linux-x86_64-fedora-gcc

R code for possible problems

plot_ple: no visible binding for global variable ‘id’
plot_tree: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id
NOTE r-devel-windows-x86_64

R code for possible problems

plot_ple: no visible binding for global variable 'id'
plot_tree: no visible binding for global variable 'id'
Undefined global functions or variables:
  id
NOTE r-patched-linux-x86_64

R code for possible problems

plot_ple: no visible binding for global variable ‘id’
plot_tree: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id
NOTE r-release-linux-x86_64

R code for possible problems

plot_ple: no visible binding for global variable ‘id’
plot_tree: no visible binding for global variable ‘id’
Undefined global functions or variables:
  id
NOTE r-release-windows-x86_64

R code for possible problems

plot_ple: no visible binding for global variable 'id'
plot_tree: no visible binding for global variable 'id'
Undefined global functions or variables:
  id
NOTE r-oldrel-macos-arm64

installed package size

  installed size is  5.7Mb
  sub-directories of 1Mb or more:
    doc   5.0Mb
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  5.7Mb
  sub-directories of 1Mb or more:
    doc   5.0Mb
NOTE r-oldrel-windows-x86_64

installed package size

  installed size is  5.7Mb
  sub-directories of 1Mb or more:
    doc   5.0Mb

Dependency Network

Dependencies Reverse dependencies dplyr partykit ranger survival glmnet ggplot2 ggparty mvtnorm coin StratifiedMedicine

Version History

new 1.0.5 Mar 9, 2026