SingleCellComplexHeatMap

Complex Heatmaps for Single Cell Expression Data with Dual Information Display

v0.1.2 · Jun 28, 2025 · MIT + file LICENSE

Description

Creates complex heatmaps for single cell RNA-seq data that simultaneously display gene expression levels (as color intensity) and expression percentages (as circle sizes). Supports gene grouping, cell type annotations, and time point comparisons. Built on top of 'ComplexHeatmap' and integrates with 'Seurat' objects. For more details see Gu (2022) <doi:10.1002/imt2.43> and Hao (2024) <doi:10.1038/s41587-023-01767-y>.

Downloads

148

Last 30 days

18091st

626

Last 90 days

2.1K

Last year

Trend: -37% (30d vs prior 30d)

CRAN Check Status

13 OK

Show all 13 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	OK	340.8s
r-devel-linux-x86_64-debian-gcc	OK	243.6s
r-devel-linux-x86_64-fedora-clang	OK	615.4s
r-devel-linux-x86_64-fedora-gcc	OK	536.2s
r-devel-windows-x86_64	OK	301s
r-oldrel-macos-arm64	OK
r-oldrel-macos-x86_64	OK	204s
r-oldrel-windows-x86_64	OK	412s
r-patched-linux-x86_64	OK	318.8s
r-release-linux-x86_64	OK	328.5s
r-release-macos-arm64	OK	78s
r-release-macos-x86_64	OK	316s
r-release-windows-x86_64	OK	306s

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 10, 2026

ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 9, 2026

ERROR r-devel-linux-x86_64-debian-gcc

package dependencies

Package required but not available: ‘Seurat’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Version History

new 0.1.2 Mar 10, 2026