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SampleCore

Sampling Strategies for Constructing Core Collections

v0.1.0 · May 28, 2026 · GPL (>= 2)

Description

Implements multiple allocation and selection strategies of sampling to construct core collections primarily from clustered or grouped germplasm collection data. Provides methods for allocating entries to clusters/groups based on group sizes, group-wise distance-based diversity metrics, and group-wise diversity index estimates. Includes procedures for selecting entries within clusters/groups through random sampling, genetic distance-based approaches, and optimized diversity metric–based selection methods. See the package documentation for more, including full list of references for the methods implemented.

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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 7 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE May 29, 2026

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Dependency Network

Dependencies Reverse dependencies cluster DiversityStats ggplot2 igraph MASS mathjaxr prospectr Rdpack Rtsne vegan LEAVcore SampleCore

Version History

new 0.1.0 May 28, 2026