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Rphylopars

Phylogenetic Comparative Tools for Missing Data and Within-Species Variation

v0.3.10 · Jan 18, 2024 · GPL (>= 2)

Description

Tools for performing phylogenetic comparative methods for datasets with with multiple observations per species (intraspecific variation or measurement error) and/or missing data (Goolsby et al. 2017). Performs ancestral state reconstruction and missing data imputation on the estimated evolutionary model, which can be specified as Brownian Motion, Ornstein-Uhlenbeck, Early-Burst, Pagel's lambda, kappa, or delta, or a star phylogeny.

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2 NOTE
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (14 non-OK)
OK r-devel-linux-x86_64-debian-clang

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OK r-devel-linux-x86_64-debian-gcc

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OK r-devel-linux-x86_64-fedora-clang

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OK r-devel-linux-x86_64-fedora-gcc

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OK r-devel-macos-arm64

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OK r-devel-windows-x86_64

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NOTE r-oldrel-macos-arm64

installed package size

  installed size is  5.5Mb
  sub-directories of 1Mb or more:
    libs   5.3Mb
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  5.7Mb
  sub-directories of 1Mb or more:
    libs   5.4Mb
OK r-oldrel-windows-x86_64

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OK r-patched-linux-x86_64

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OK r-release-linux-x86_64

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OK r-release-macos-arm64

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OK r-release-macos-x86_64

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OK r-release-windows-x86_64

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Check History

NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-oldrel-macos-arm64

installed package size

  installed size is  5.5Mb
  sub-directories of 1Mb or more:
    libs   5.3Mb
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  5.7Mb
  sub-directories of 1Mb or more:
    libs   5.4Mb

Reverse Dependencies (3)

imports

suggests

Dependency Network

Dependencies Reverse dependencies ape Rcpp doBy phylolm phytools Matrix MASS numDeriv RRgeo RRphylo phylosem Rphylopars

Version History

new 0.3.10 Mar 9, 2026