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Plasmidprofiler

Visualization of Plasmid Profile Results

v0.1.6 · Jan 6, 2017 · Apache License 2.0

Description

Contains functions developed to combine the results of querying a plasmid database using short-read sequence typing with the results of a blast analysis against the query results.

Downloads

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Last 90 days

176

Last year

CRAN Check Status

6 NOTE
8 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang NOTE
r-devel-linux-x86_64-fedora-gcc NOTE
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 NOTE
r-release-linux-x86_64 NOTE
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (14 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

for non-standard things in the check directory

Found the following files/directories:
  ‘P2Run.csv’ ‘P2Run.html’ ‘P2Run.png’
NOTE r-devel-linux-x86_64-debian-gcc

for non-standard things in the check directory

Found the following files/directories:
  ‘P2Run.csv’ ‘P2Run.html’ ‘P2Run.png’
NOTE r-devel-linux-x86_64-fedora-clang

for non-standard things in the check directory

Found the following files/directories:
  ‘P2Run.csv’ ‘P2Run.html’ ‘P2Run.png’
NOTE r-devel-linux-x86_64-fedora-gcc

for non-standard things in the check directory

Found the following files/directories:
  ‘P2Run.csv’ ‘P2Run.html’ ‘P2Run.png’
OK r-devel-macos-arm64

*


            
OK r-devel-windows-x86_64

*


            
OK r-oldrel-macos-arm64

*


            
OK r-oldrel-macos-x86_64

*


            
OK r-oldrel-windows-x86_64

*


            
NOTE r-patched-linux-x86_64

for non-standard things in the check directory

Found the following files/directories:
  ‘P2Run.csv’ ‘P2Run.html’ ‘P2Run.png’
NOTE r-release-linux-x86_64

for non-standard things in the check directory

Found the following files/directories:
  ‘P2Run.csv’ ‘P2Run.html’ ‘P2Run.png’
OK r-release-macos-arm64

*


            
OK r-release-macos-x86_64

*


            
OK r-release-windows-x86_64

*


            

Check History

NOTE 8 OK · 6 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-devel-linux-x86_64-debian-clang

for non-standard things in the check directory

Found the following files/directories:
  ‘P2Run.csv’ ‘P2Run.html’ ‘P2Run.png’
NOTE r-devel-linux-x86_64-debian-gcc

for non-standard things in the check directory

Found the following files/directories:
  ‘P2Run.csv’ ‘P2Run.html’ ‘P2Run.png’
NOTE r-devel-linux-x86_64-fedora-clang

for non-standard things in the check directory

Found the following files/directories:
  ‘P2Run.csv’ ‘P2Run.html’ ‘P2Run.png’
NOTE r-devel-linux-x86_64-fedora-gcc

for non-standard things in the check directory

Found the following files/directories:
  ‘P2Run.csv’ ‘P2Run.html’ ‘P2Run.png’
NOTE r-patched-linux-x86_64

for non-standard things in the check directory

Found the following files/directories:
  ‘P2Run.csv’ ‘P2Run.html’ ‘P2Run.png’
NOTE r-release-linux-x86_64

for non-standard things in the check directory

Found the following files/directories:
  ‘P2Run.csv’ ‘P2Run.html’ ‘P2Run.png’

Dependency Network

Dependencies Reverse dependencies ape dplyr gdata ggdendro ggplot2 gridExtra gtable htmlwidgets magrittr plotly plyr RColorBrewer reshape2 stringr Plasmidprofiler

Version History

new 0.1.6 Mar 9, 2026