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PHSMM

Penalised Maximum Likelihood Estimation for Hidden Semi-Markov Models

v1.0 · Feb 9, 2021 · GPL-3

Description

Provides tools for penalised maximum likelihood estimation of hidden semi-Markov models (HSMMs) with flexible state dwell-time distributions. These include functions for model fitting, model checking and state-decoding. The package considers HSMMs for univariate time series with state-dependent gamma, normal, Poisson or Bernoulli distributions. For details, see Pohle, J., Adam, T. and Beumer, L.T. (2021): Flexible estimation of the state dwell-time distribution in hidden semi-Markov models. <arXiv:2101.09197>.

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CRAN incoming feasibility

Maintainer: ‘Jennifer Pohle <jennifer.pohle@uni-bielefeld.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jennifer",
                    family = "Pohle",
                    role = c("aut", "cre"),
                    email = "jennifer.pohle@uni-bielefeld.de")
as necessary.

The Description field contains
  hidden semi-Markov models. <arXiv:2101.09197>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Jennifer Pohle <jennifer.pohle@uni-bielefeld.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jennifer",
                    family = "Pohle",
                    role = c("aut", "cre"),
                    email = "jennifer.pohle@uni-bielefeld.de")
as necessary.

The Description field contains
  hidden semi-Markov models. <arXiv:2101.09197>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
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Check History

NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Jennifer Pohle <jennifer.pohle@uni-bielefeld.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jennifer",
                    family = "Pohle",
                    role = c("aut", "cre"),
                    email = "jennifer.pohle@uni-bielefeld.de")
as necessary.

The Description field contains
  hidden semi-Markov models. <arXiv:2101.09197>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Jennifer Pohle <jennifer.pohle@uni-bielefeld.de>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Jennifer",
                    family = "Pohle",
                    role = c("aut", "cre"),
                    email = "jennifer.pohle@uni-bielefeld.de")
as necessary.

The Description field contains
  hidden semi-Markov models. <arXiv:2101.09197>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.

Reverse Dependencies (1)

suggests

Dependency Network

Dependencies Reverse dependencies Rcpp LaMa PHSMM

Version History

new 1.0 Mar 9, 2026