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PAutilities

Streamline Physical Activity Research

v1.2.1 · Jun 11, 2025 · GPL-3

Description

Functions that support a broad range of common tasks in physical activity research, including but not limited to creation of Bland-Altman plots (<doi:10.1136/bmj.313.7049.106>), metabolic calculations such as basal metabolic rate predictions (<https://europepmc.org/article/med/4044297/reloa>), demographic calculations such as age-for-body-mass-index percentile (<https://www.cdc.gov/growthcharts/cdc_charts.htm>), and analysis of bout detection algorithm performance (<https://pubmed.ncbi.nlm.nih.gov/34258524/>).

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CRAN Check Status

1 ERROR
13 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang ERROR
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (14 non-OK)
ERROR r-devel-linux-x86_64-debian-clang

re-building of vignette outputs

Error(s) in re-building vignettes:
  ...
--- re-building ‘tpm.Rmd’ using rmarkdown

Quitting from tpm.Rmd:53-59 [TPM7]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `get_matchings()`:
! matchingMarkets package required for get_matchings function!
---
Backtrace:
    ▆
 1. └─PAutilities::get_transition_info(...)
 2.   └─PAutilities:::get_matchings(prefs)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'tpm.Rmd' failed with diagnostics:
matchingMarkets package required for get_matchings function!
--- failed re-building ‘tpm.Rmd’

SUMMARY: processing the following file failed:
  ‘tpm.Rmd’

Error: Vignette re-building failed.
Execution halted
OK r-devel-linux-x86_64-debian-gcc

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OK r-devel-linux-x86_64-fedora-clang

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OK r-devel-linux-x86_64-fedora-gcc

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OK r-devel-macos-arm64

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OK r-devel-windows-x86_64

*


            
OK r-oldrel-macos-arm64

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OK r-oldrel-macos-x86_64

*


            
OK r-oldrel-windows-x86_64

*


            
OK r-patched-linux-x86_64

*


            
OK r-release-linux-x86_64

*


            
OK r-release-macos-arm64

*


            
OK r-release-macos-x86_64

*


            
OK r-release-windows-x86_64

*


            

Check History

ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 9, 2026
ERROR r-devel-linux-x86_64-debian-clang

re-building of vignette outputs

Error(s) in re-building vignettes:
  ...
--- re-building ‘tpm.Rmd’ using rmarkdown

Quitting from tpm.Rmd:53-59 [TPM7]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `get_matchings()`:
! matchingMarkets package required for get_matchings function!
---
Backtrace:
    ▆
 1. └─PAutilities::get_transition_info(...)
 2.   └─PAutilities:::get_matchings(prefs)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Reverse Dependencies (2)

Dependency Network

Dependencies Reverse dependencies dplyr equivalence ggplot2 lazyeval lubridate magrittr reshape2 rlang Rcpp Sojourn TwoRegression PAutilities

Version History

new 1.2.1 Mar 10, 2026