OmicFlow

Fast and Efficient (Automated) Analysis of Sparse Omics Data

v1.5.1 · Feb 27, 2026 · MIT + file LICENSE

Description

A generalised data structure for fast and efficient loading and data munching of sparse omics data. The 'OmicFlow' requires an up-front validated metadata template from the user, which serves as a guide to connect all the pieces together by aligning them into a single object that is defined as an 'omics' class. Once this unified structure is established, users can perform manual subsetting, visualisation, and statistical analysis, or leverage the automated 'autoFlow' method to generate a comprehensive report.

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CRAN Check Status

2 NOTE

12 OK

Show all 14 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	OK	230.5s
r-devel-linux-x86_64-debian-gcc	OK	152.2s
r-devel-linux-x86_64-fedora-clang	OK	347.7s
r-devel-linux-x86_64-fedora-gcc	OK	372.5s
r-devel-macos-arm64	OK	48s
r-devel-windows-x86_64	OK	263s
r-oldrel-macos-arm64	NOTE	45s
r-oldrel-macos-x86_64	NOTE	217s
r-oldrel-windows-x86_64	OK	322s
r-patched-linux-x86_64	OK	213.9s
r-release-linux-x86_64	OK	215.2s
r-release-macos-arm64	OK	42s
r-release-macos-x86_64	OK	162s
r-release-windows-x86_64	OK	261s

Check details (14 non-OK)

OK r-devel-linux-x86_64-debian-clang

OK r-devel-linux-x86_64-debian-gcc

OK r-devel-linux-x86_64-fedora-clang

OK r-devel-linux-x86_64-fedora-gcc

OK r-devel-macos-arm64

OK r-devel-windows-x86_64

NOTE r-oldrel-macos-arm64

installed package size

  installed size is  5.0Mb
  sub-directories of 1Mb or more:
    libs   4.4Mb

NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  5.2Mb
  sub-directories of 1Mb or more:
    libs   4.5Mb

OK r-oldrel-windows-x86_64

OK r-patched-linux-x86_64

OK r-release-linux-x86_64

OK r-release-macos-arm64

OK r-release-macos-x86_64

OK r-release-windows-x86_64

Check History

NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026

NOTE r-oldrel-macos-arm64

installed package size

  installed size is  5.0Mb
  sub-directories of 1Mb or more:
    libs   4.4Mb

NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  5.2Mb
  sub-directories of 1Mb or more:
    libs   4.5Mb

Dependency Network

Version History

new 1.5.1 Mar 9, 2026