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MMLR

Fitting Markov-Modulated Linear Regression Models

v0.2.0 · Jan 9, 2020 · GPL (>= 2)

Description

A set of tools for fitting Markov-modulated linear regression, where responses Y(t) are time-additive, and model operates in the external environment, which is described as a continuous time Markov chain with finite state space. Model is proposed by Alexander Andronov (2012) <arXiv:1901.09600v1> and algorithm of parameters estimation is based on eigenvalues and eigenvectors decomposition. Markov-switching regression models have the same idea of varying the regression parameters randomly in accordance with external environment. The difference is that for Markov-modulated linear regression model the external environment is described as a continuous-time homogeneous irreducible Markov chain with known parameters while switching models consider Markov chain as unobserved and estimation procedure involves estimation of transition matrix. These models have significant differences in terms of the analytical approach. Also, package provides a set of data simulation tools for Markov-modulated linear regression (for academical/research purposes). Research project No. 1.1.1.2/VIAA/1/16/075.

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NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Nadezda Spiridovska <Spiridovska.N@tsi.lv>’

The Description field contains
  <arXiv:1901.09600v1> and algorithm of parameters estimation is based on
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE r-devel-linux-x86_64-debian-clang

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                     ^
checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                                      ^
checkRd: (-1) B_est.Rd:34: Lost braces; missing escapes or markup?
    34 | where vector of average sojourn times in each state $t_{i}$ is calculated using function Aver_soj_time, $t_{i}$ is an element of tGiven, $x_{i}
...[truncated]...
as uniform distribution on (0, k$tau_{i}$).
       |                                                                            ^
checkRd: (-1) randomizeTau.Rd:29: Lost braces; missing escapes or markup?
    29 | Initial values of observation times are multiplied by a random value ($tau_{i}$ x k x rnd(0, 1)). All times are independent and time of ith observation has uniform distribution on (0, k$tau_{i}$).
       |                                                                                                                                                                                               ^
checkRd: (-1) randomizeX.Rd:41: Lost braces; missing escapes or markup?
    41 | Random perturbations are added to the initial values of matrix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Nadezda Spiridovska <Spiridovska.N@tsi.lv>’

The Description field contains
  <arXiv:1901.09600v1> and algorithm of parameters estimation is based on
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE r-devel-linux-x86_64-debian-gcc

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                     ^
checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                                      ^
checkRd: (-1) B_est.Rd:34: Lost braces; missing escapes or markup?
    34 | where vector of average sojourn times in each state $t_{i}$ is calculated using function Aver_soj_time, $t_{i}$ is an element of tGiven, $x_{i}
...[truncated]...
as uniform distribution on (0, k$tau_{i}$).
       |                                                                            ^
checkRd: (-1) randomizeTau.Rd:29: Lost braces; missing escapes or markup?
    29 | Initial values of observation times are multiplied by a random value ($tau_{i}$ x k x rnd(0, 1)). All times are independent and time of ith observation has uniform distribution on (0, k$tau_{i}$).
       |                                                                                                                                                                                               ^
checkRd: (-1) randomizeX.Rd:41: Lost braces; missing escapes or markup?
    41 | Random perturbations are added to the initial values of matrix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-devel-linux-x86_64-fedora-clang

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                     ^
checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                                      ^
checkRd: (-1) B_est.Rd:34: Lost braces; missing escapes or markup?
    34 | where vector of average sojourn times in each state $t_{i}$ is calculated using function Aver_soj_time, $t_{i}$ is an element of tGiven, $x_{i}
...[truncated]...
as uniform distribution on (0, k$tau_{i}$).
       |                                                                            ^
checkRd: (-1) randomizeTau.Rd:29: Lost braces; missing escapes or markup?
    29 | Initial values of observation times are multiplied by a random value ($tau_{i}$ x k x rnd(0, 1)). All times are independent and time of ith observation has uniform distribution on (0, k$tau_{i}$).
       |                                                                                                                                                                                               ^
checkRd: (-1) randomizeX.Rd:41: Lost braces; missing escapes or markup?
    41 | Random perturbations are added to the initial values of matrix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-devel-linux-x86_64-fedora-gcc

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                     ^
checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                                      ^
checkRd: (-1) B_est.Rd:34: Lost braces; missing escapes or markup?
    34 | where vector of average sojourn times in each state $t_{i}$ is calculated using function Aver_soj_time, $t_{i}$ is an element of tGiven, $x_{i}
...[truncated]...
as uniform distribution on (0, k$tau_{i}$).
       |                                                                            ^
checkRd: (-1) randomizeTau.Rd:29: Lost braces; missing escapes or markup?
    29 | Initial values of observation times are multiplied by a random value ($tau_{i}$ x k x rnd(0, 1)). All times are independent and time of ith observation has uniform distribution on (0, k$tau_{i}$).
       |                                                                                                                                                                                               ^
checkRd: (-1) randomizeX.Rd:41: Lost braces; missing escapes or markup?
    41 | Random perturbations are added to the initial values of matrix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-devel-macos-arm64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                     ^
checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                                      ^
checkRd: (-1) B_est.Rd:34: Lost braces; missing escapes or markup?
    34 | where vector of average sojourn times in each state $t_{i}$ is calculated using function Aver_soj_time, $t_{i}$ is an element of tGiven, $x_{i}
...[truncated]...
as uniform distribution on (0, k$tau_{i}$).
       |                                                                            ^
checkRd: (-1) randomizeTau.Rd:29: Lost braces; missing escapes or markup?
    29 | Initial values of observation times are multiplied by a random value ($tau_{i}$ x k x rnd(0, 1)). All times are independent and time of ith observation has uniform distribution on (0, k$tau_{i}$).
       |                                                                                                                                                                                               ^
checkRd: (-1) randomizeX.Rd:41: Lost braces; missing escapes or markup?
    41 | Random perturbations are added to the initial values of matrix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-devel-windows-x86_64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                     ^
checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                                      ^
checkRd: (-1) B_est.Rd:34: Lost braces; missing escapes or markup?
    34 | where vector of average sojourn times in each state $t_{i}$ is calculated using function Aver_soj_time, $t_{i}$ is an element of tGiven, $x_{i}
...[truncated]...
as uniform distribution on (0, k$tau_{i}$).
       |                                                                            ^
checkRd: (-1) randomizeTau.Rd:29: Lost braces; missing escapes or markup?
    29 | Initial values of observation times are multiplied by a random value ($tau_{i}$ x k x rnd(0, 1)). All times are independent and time of ith observation has uniform distribution on (0, k$tau_{i}$).
       |                                                                                                                                                                                               ^
checkRd: (-1) randomizeX.Rd:41: Lost braces; missing escapes or markup?
    41 | Random perturbations are added to the initial values of matrix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-oldrel-macos-arm64

LazyData

'LazyData' is specified without a 'data' directory
NOTE r-oldrel-macos-arm64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                     ^
checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                                      ^
checkRd: (-1) B_est.Rd:34: Lost braces; missing escapes or markup?
    34 | where vector of average sojourn times in each state $t_{i}$ is calculated using function Aver_soj_time, $t_{i}$ is an element of tGiven, $x_{i}
...[truncated]...
as uniform distribution on (0, k$tau_{i}$).
       |                                                                            ^
checkRd: (-1) randomizeTau.Rd:29: Lost braces; missing escapes or markup?
    29 | Initial values of observation times are multiplied by a random value ($tau_{i}$ x k x rnd(0, 1)). All times are independent and time of ith observation has uniform distribution on (0, k$tau_{i}$).
       |                                                                                                                                                                                               ^
checkRd: (-1) randomizeX.Rd:41: Lost braces; missing escapes or markup?
    41 | Random perturbations are added to the initial values of matrix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-oldrel-macos-x86_64

LazyData

'LazyData' is specified without a 'data' directory
NOTE r-oldrel-macos-x86_64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                     ^
checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                                      ^
checkRd: (-1) B_est.Rd:34: Lost braces; missing escapes or markup?
    34 | where vector of average sojourn times in each state $t_{i}$ is calculated using function Aver_soj_time, $t_{i}$ is an element of tGiven, $x_{i}
...[truncated]...
as uniform distribution on (0, k$tau_{i}$).
       |                                                                            ^
checkRd: (-1) randomizeTau.Rd:29: Lost braces; missing escapes or markup?
    29 | Initial values of observation times are multiplied by a random value ($tau_{i}$ x k x rnd(0, 1)). All times are independent and time of ith observation has uniform distribution on (0, k$tau_{i}$).
       |                                                                                                                                                                                               ^
checkRd: (-1) randomizeX.Rd:41: Lost braces; missing escapes or markup?
    41 | Random perturbations are added to the initial values of matrix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-oldrel-windows-x86_64

LazyData

'LazyData' is specified without a 'data' directory
NOTE r-oldrel-windows-x86_64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                     ^
checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                                      ^
checkRd: (-1) B_est.Rd:34: Lost braces; missing escapes or markup?
    34 | where vector of average sojourn times in each state $t_{i}$ is calculated using function Aver_soj_time, $t_{i}$ is an element of tGiven, $x_{i}
...[truncated]...
as uniform distribution on (0, k$tau_{i}$).
       |                                                                            ^
checkRd: (-1) randomizeTau.Rd:29: Lost braces; missing escapes or markup?
    29 | Initial values of observation times are multiplied by a random value ($tau_{i}$ x k x rnd(0, 1)). All times are independent and time of ith observation has uniform distribution on (0, k$tau_{i}$).
       |                                                                                                                                                                                               ^
checkRd: (-1) randomizeX.Rd:41: Lost braces; missing escapes or markup?
    41 | Random perturbations are added to the initial values of matrix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-patched-linux-x86_64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                     ^
checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                                      ^
checkRd: (-1) B_est.Rd:34: Lost braces; missing escapes or markup?
    34 | where vector of average sojourn times in each state $t_{i}$ is calculated using function Aver_soj_time, $t_{i}$ is an element of tGiven, $x_{i}
...[truncated]...
as uniform distribution on (0, k$tau_{i}$).
       |                                                                            ^
checkRd: (-1) randomizeTau.Rd:29: Lost braces; missing escapes or markup?
    29 | Initial values of observation times are multiplied by a random value ($tau_{i}$ x k x rnd(0, 1)). All times are independent and time of ith observation has uniform distribution on (0, k$tau_{i}$).
       |                                                                                                                                                                                               ^
checkRd: (-1) randomizeX.Rd:41: Lost braces; missing escapes or markup?
    41 | Random perturbations are added to the initial values of matrix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-release-linux-x86_64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                     ^
checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                                      ^
checkRd: (-1) B_est.Rd:34: Lost braces; missing escapes or markup?
    34 | where vector of average sojourn times in each state $t_{i}$ is calculated using function Aver_soj_time, $t_{i}$ is an element of tGiven, $x_{i}
...[truncated]...
as uniform distribution on (0, k$tau_{i}$).
       |                                                                            ^
checkRd: (-1) randomizeTau.Rd:29: Lost braces; missing escapes or markup?
    29 | Initial values of observation times are multiplied by a random value ($tau_{i}$ x k x rnd(0, 1)). All times are independent and time of ith observation has uniform distribution on (0, k$tau_{i}$).
       |                                                                                                                                                                                               ^
checkRd: (-1) randomizeX.Rd:41: Lost braces; missing escapes or markup?
    41 | Random perturbations are added to the initial values of matrix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-release-macos-arm64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                     ^
checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                                      ^
checkRd: (-1) B_est.Rd:34: Lost braces; missing escapes or markup?
    34 | where vector of average sojourn times in each state $t_{i}$ is calculated using function Aver_soj_time, $t_{i}$ is an element of tGiven, $x_{i}
...[truncated]...
as uniform distribution on (0, k$tau_{i}$).
       |                                                                            ^
checkRd: (-1) randomizeTau.Rd:29: Lost braces; missing escapes or markup?
    29 | Initial values of observation times are multiplied by a random value ($tau_{i}$ x k x rnd(0, 1)). All times are independent and time of ith observation has uniform distribution on (0, k$tau_{i}$).
       |                                                                                                                                                                                               ^
checkRd: (-1) randomizeX.Rd:41: Lost braces; missing escapes or markup?
    41 | Random perturbations are added to the initial values of matrix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                     ^
checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                                      ^
checkRd: (-1) B_est.Rd:34: Lost braces; missing escapes or markup?
    34 | where vector of average sojourn times in each state $t_{i}$ is calculated using function Aver_soj_time, $t_{i}$ is an element of tGiven, $x_{i}
...[truncated]...
as uniform distribution on (0, k$tau_{i}$).
       |                                                                            ^
checkRd: (-1) randomizeTau.Rd:29: Lost braces; missing escapes or markup?
    29 | Initial values of observation times are multiplied by a random value ($tau_{i}$ x k x rnd(0, 1)). All times are independent and time of ith observation has uniform distribution on (0, k$tau_{i}$).
       |                                                                                                                                                                                               ^
checkRd: (-1) randomizeX.Rd:41: Lost braces; missing escapes or markup?
    41 | Random perturbations are added to the initial values of matrix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                     ^
checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |                                                                                                                                                      ^
checkRd: (-1) B_est.Rd:34: Lost braces; missing escapes or markup?
    34 | where vector of average sojourn times in each state $t_{i}$ is calculated using function Aver_soj_time, $t_{i}$ is an element of tGiven, $x_{i}
...[truncated]...
as uniform distribution on (0, k$tau_{i}$).
       |                                                                            ^
checkRd: (-1) randomizeTau.Rd:29: Lost braces; missing escapes or markup?
    29 | Initial values of observation times are multiplied by a random value ($tau_{i}$ x k x rnd(0, 1)). All times are independent and time of ith observation has uniform distribution on (0, k$tau_{i}$).
       |                                                                                                                                                                                               ^
checkRd: (-1) randomizeX.Rd:41: Lost braces; missing escapes or markup?
    41 | Random perturbations are added to the initial values of matrix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^

Check History

NOTE 0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Nadezda Spiridovska <Spiridovska.N@tsi.lv>’

The Description field contains
  <arXiv:1901.09600v1> and algorithm of parameters estimation is based on
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Nadezda Spiridovska <Spiridovska.N@tsi.lv>’

The Description field contains
  <arXiv:1901.09600v1> and algorithm of parameters estimation is based on
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE r-devel-linux-x86_64-fedora-clang

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |   
...[truncated]...
trix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-devel-linux-x86_64-fedora-gcc

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |   
...[truncated]...
trix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-devel-macos-arm64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |   
...[truncated]...
trix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-devel-windows-x86_64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |   
...[truncated]...
trix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-patched-linux-x86_64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |   
...[truncated]...
trix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-release-linux-x86_64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |   
...[truncated]...
trix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-release-macos-arm64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |   
...[truncated]...
trix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |   
...[truncated]...
trix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |   
...[truncated]...
trix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-oldrel-macos-arm64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |   
...[truncated]...
trix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-oldrel-macos-x86_64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |   
...[truncated]...
trix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^
NOTE r-oldrel-windows-x86_64

Rd files

checkRd: (-1) Aver_soj_time.Rd:25: Lost braces; missing escapes or markup?
    25 | Matrix Q is so-called Generator matrix:  \eqn{Q=\lambda-\Lambda, where \lambda} is matrix with known transition rates from state $s_{i}$ to state $s_{j}$,
       |   
...[truncated]...
trix X elements ($X_{i,j}$ + rnd), which are distributed according to a chosen distribution (possible alternatives: uniform, exponential and gamma distribution).
       |                                                                               ^

Dependency Network

Dependencies Reverse dependencies pracma MMLR

Version History

new 0.2.0 Mar 10, 2026
updated 0.2.0 ← 0.1.0 diff Jan 8, 2020
new 0.1.0 Feb 2, 2019