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IGST

Informative Gene Selection Tool

v0.1.0 · Jan 31, 2020 · GPL-3

Description

Mining informative genes with certain biological meanings are important for clinical diagnosis of disease and discovery of disease mechanisms in plants and animals. This process involves identification of relevant genes and removal of redundant genes as much as possible from a whole gene set. This package selects the informative genes related to a specific trait using gene expression dataset. These trait specific genes are considered as informative genes. This package returns the informative gene set from the high dimensional gene expression data using a combination of methods SVM and MRMR (for feature selection) with bootstrapping procedure.

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CRAN Check Status

2 NOTE
12 OK
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r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (14 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Nitesh Kumar Sharma <sharmanitesh.iasri@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Nitesh", "Kumar"),
                      family = "Sharma",
                      role = c("aut", "cre"),
                      email = "sharmanitesh.iasri@gmail.com"),
               person(given = c("Dwijesh", "Chandra"),
                      family = "Mishra",
                      role = "aut"),
               person(given = "Neeraj",
                      family = "Budhlakoti",
                      role = "aut"),
               person(given = c("Md.", "Samir"),
                      family = "Farooqi",
                      role = "aut"))
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Nitesh Kumar Sharma <sharmanitesh.iasri@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Nitesh", "Kumar"),
                      family = "Sharma",
                      role = c("aut", "cre"),
                      email = "sharmanitesh.iasri@gmail.com"),
               person(given = c("Dwijesh", "Chandra"),
                      family = "Mishra",
                      role = "aut"),
               person(given = "Neeraj",
                      family = "Budhlakoti",
                      role = "aut"),
               person(given = c("Md.", "Samir"),
                      family = "Farooqi",
                      role = "aut"))
as necessary.
OK r-devel-linux-x86_64-fedora-clang

*


            
OK r-devel-linux-x86_64-fedora-gcc

*


            
OK r-devel-macos-arm64

*


            
OK r-devel-windows-x86_64

*


            
OK r-oldrel-macos-arm64

*


            
OK r-oldrel-macos-x86_64

*


            
OK r-oldrel-windows-x86_64

*


            
OK r-patched-linux-x86_64

*


            
OK r-release-linux-x86_64

*


            
OK r-release-macos-arm64

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OK r-release-macos-x86_64

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OK r-release-windows-x86_64

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Check History

NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Nitesh Kumar Sharma <sharmanitesh.iasri@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Nitesh", "Kumar"),
                      family = "Sharma",
                      role = c("aut", "cre"),
                      email = "sharmanitesh.iasri@gmail.com"),
               person(given = c("Dwijesh", "Chandra"),
                      family = "Mishra",
                      role = "aut"),
               person(given = "Neeraj"
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Nitesh Kumar Sharma <sharmanitesh.iasri@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Nitesh", "Kumar"),
                      family = "Sharma",
                      role = c("aut", "cre"),
                      email = "sharmanitesh.iasri@gmail.com"),
               person(given = c("Dwijesh", "Chandra"),
                      family = "Mishra",
                      role = "aut"),
               person(given = "Neeraj"

Dependency Network

Dependencies Reverse dependencies e1071 BootMRMR IGST

Version History

new 0.1.0 Mar 10, 2026