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GapAnalysis

Conservation Indicators Using Spatial Information

v2.0.2 · May 12, 2026 · GPL-3

Description

Supports the assessment of the degree of conservation of taxa in conservation systems, both in ex situ (in genebanks, botanical gardens, and other repositories), and in situ (in protected natural areas). Methods are described in Carver et al. (2021) <doi:10.1111/ecog.05430>, building on Khoury et al. (2020) <doi:10.1073/pnas.2007029117>, Khoury et al. (2019) <doi:10.1016/j.ecolind.2018.11.016>, Khoury et al. (2019) <doi:10.1111/DDI.13008>, Castaneda-Alvarez et al. (2016) <doi:10.1038/nplants.2016.22>, and Ramirez-Villegas et al. (2010) <doi:10.1371/journal.pone.0013497>.

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CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE May 16, 2026
ERROR 11 OK · 0 NOTE · 0 WARNING · 2 ERROR · 0 FAILURE May 6, 2026
ERROR r-devel-linux-x86_64-debian-gcc

re-building of vignette outputs

Error(s) in re-building vignettes:
  ...
--- re-building ‘multipleSpecies_vignette.Rmd’ using rmarkdown

Quitting from multipleSpecies_vignette.Rmd:151-237 [run-gap-analysis]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
...[truncated]...
h diagnostics:
arguments imply differing number of rows: 0, 1
--- failed re-building ‘multipleSpecies_vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘multipleSpecies_vignette.Rmd’

Error: Vignette re-building failed.
Execution halted
ERROR r-devel-windows-x86_64

re-building of vignette outputs

Error(s) in re-building vignettes:
--- re-building 'multipleSpecies_vignette.Rmd' using rmarkdown

Quitting from multipleSpecies_vignette.Rmd:151-237 [run-gap-analysis]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

...[truncated]...
h diagnostics:
arguments imply differing number of rows: 0, 1
--- failed re-building 'multipleSpecies_vignette.Rmd'

SUMMARY: processing the following file failed:
  'multipleSpecies_vignette.Rmd'

Error: Vignette re-building failed.
Execution halted
OK 5 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 10, 2026

Dependency Network

Dependencies Reverse dependencies dataverse dplyr leaflet terra GapAnalysis

Version History

updated 2.0.2 ← 2.0.0 diff May 12, 2026
new 2.0.0 Apr 9, 2026