Description
Performs fragment analysis using genetic data coming from capillary electrophoresis machines. These are files with FSA extension which stands for FASTA-type file, and .txt files from Beckman CEQ 8000 system, both contain DNA fragment intensities read by machinery. In addition to visualization, it performs automatic scoring of SSRs (Sample Sequence Repeats; a type of genetic marker very common across the genome) and other type of PCR markers (standing for Polymerase Chain Reaction) in biparental populations such as F1, F2, BC (backcross), and diversity panels (collection of genetic diversity).
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Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (14 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Giovanny Covarrubias-Pazaran <covarrubiasp@wisc.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Giovanny",
family = "Covarrubias-Pazaran",
role = c("aut", "cre"),
email = "covarrubiasp@wisc.edu"),
person(given = "Luis",
family = "Diaz-Garcia",
role = "aut"),
person(given = "Brandon",
family = "Schlautman",
role = "aut"),
person(given = "Walter",
family = "Salazar",
role = "aut"),
person(given = "Juan",
family = "Zalapa.",
role = "aut"))
as necessary.
Package CITATION file contains call(s) to old-style citEntry(). Please
use bibentry() instead.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Giovanny Covarrubias-Pazaran <covarrubiasp@wisc.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Giovanny",
family = "Covarrubias-Pazaran",
role = c("aut", "cre"),
email = "covarrubiasp@wisc.edu"),
person(given = "Luis",
family = "Diaz-Garcia",
role = "aut"),
person(given = "Brandon",
family = "Schlautman",
role = "aut"),
person(given = "Walter",
family = "Salazar",
role = "aut"),
person(given = "Juan",
family = "Zalapa.",
role = "aut"))
as necessary.
Package CITATION file contains call(s) to old-style citEntry(). Please
use bibentry() instead.
OK
r-devel-linux-x86_64-fedora-clang
*
OK
r-devel-linux-x86_64-fedora-gcc
*
OK
r-devel-macos-arm64
*
OK
r-devel-windows-x86_64
*
OK
r-oldrel-macos-arm64
*
OK
r-oldrel-macos-x86_64
*
OK
r-oldrel-windows-x86_64
*
OK
r-patched-linux-x86_64
*
OK
r-release-linux-x86_64
*
OK
r-release-macos-arm64
*
OK
r-release-macos-x86_64
*
OK
r-release-windows-x86_64
*
Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Giovanny Covarrubias-Pazaran <covarrubiasp@wisc.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Giovanny",
family = "Covarrubias-Pazaran",
role = c("aut", "cre"),
email = "covarrubiasp@wisc.edu"),
person(given = "Luis",
family = "Diaz-Garcia",
role = "aut"),
person(given = "Brandon",
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Giovanny Covarrubias-Pazaran <covarrubiasp@wisc.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Giovanny",
family = "Covarrubias-Pazaran",
role = c("aut", "cre"),
email = "covarrubiasp@wisc.edu"),
person(given = "Luis",
family = "Diaz-Garcia",
role = "aut"),
person(given = "Brandon",
Reverse Dependencies (1)
imports
Dependency Network
Version History
new
1.0.9
Mar 10, 2026