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EMMIXgene

A Mixture Model-Based Approach to the Clustering of Microarray Expression Data

v0.1.4 · Jan 21, 2024 · GPL (>= 3)

Description

Provides unsupervised selection and clustering of microarray data using mixture models. Following the methods described in McLachlan, Bean and Peel (2002) <doi:10.1093/bioinformatics/18.3.413> a subset of genes are selected based one the likelihood ratio statistic for the test of one versus two components when fitting mixtures of t-distributions to the expression data for each gene. The dimensionality of this gene subset is further reduced through the use of mixtures of factor analyzers, allowing the tissue samples to be clustered by fitting mixtures of normal distributions.

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installed package size

  installed size is  6.0Mb
  sub-directories of 1Mb or more:
    data   2.0Mb
    libs   3.9Mb
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  6.1Mb
  sub-directories of 1Mb or more:
    data   2.0Mb
    libs   4.0Mb
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NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-oldrel-macos-arm64

installed package size

  installed size is  6.0Mb
  sub-directories of 1Mb or more:
    data   2.0Mb
    libs   3.9Mb
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  6.1Mb
  sub-directories of 1Mb or more:
    data   2.0Mb
    libs   4.0Mb

Dependency Network

Dependencies Reverse dependencies Rcpp mclust reshape ggplot2 scales EMMIXgene

Version History

new 0.1.4 Mar 9, 2026