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BLSM

Bayesian Latent Space Model

v0.1.0 · Apr 26, 2018 · GPL (>= 2)

Description

Provides a Bayesian latent space model for complex networks, either weighted or unweighted. Given an observed input graph, the estimates for the latent coordinates of the nodes are obtained through a Bayesian MCMC algorithm. The overall likelihood of the graph depends on a fundamental probability equation, which is defined so that ties are more likely to exist between nodes whose latent space coordinates are close. The package is mainly based on the model by Hoff, Raftery and Handcock (2002) <doi:10.1198/016214502388618906> and contains some extra features (e.g., removal of the Procrustean step, weights implemented as coefficients of the latent distances, 3D plots). The original code related to the above model was retrieved from <https://www.stat.washington.edu/people/pdhoff/Code/hoff_raftery_handcock_2002_jasa/>. Users can inspect the MCMC simulation, create and customize insightful graphical representations or apply clustering techniques.

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r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang NOTE
r-devel-linux-x86_64-fedora-gcc NOTE
r-devel-macos-arm64 NOTE
r-devel-windows-x86_64 NOTE
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 NOTE
r-patched-linux-x86_64 NOTE
r-release-linux-x86_64 NOTE
r-release-macos-arm64 NOTE
r-release-macos-x86_64 NOTE
r-release-windows-x86_64 NOTE
Check details (16 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:58: Lost braces
    58 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) estimate_latent_positions.Rd:59: Lost braces
    59 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) estimate_latent_positions.Rd:60: Lost braces
    60 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:9: Lost braces
     9 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) example_blsm_obj.Rd:10: Lost braces
    10 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:11-15: Lost braces
    11 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:16: Lost braces
    16 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) example_blsm_obj.Rd:17: Lost braces
    17 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) example_blsm_obj.Rd:18: Lost braces
    18 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
NOTE r-devel-linux-x86_64-debian-gcc

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:58: Lost braces
    58 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) estimate_latent_positions.Rd:59: Lost braces
    59 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) estimate_latent_positions.Rd:60: Lost braces
    60 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:9: Lost braces
     9 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) example_blsm_obj.Rd:10: Lost braces
    10 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:11-15: Lost braces
    11 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:16: Lost braces
    16 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) example_blsm_obj.Rd:17: Lost braces
    17 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) example_blsm_obj.Rd:18: Lost braces
    18 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
NOTE r-devel-linux-x86_64-fedora-clang

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:58: Lost braces
    58 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) estimate_latent_positions.Rd:59: Lost braces
    59 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) estimate_latent_positions.Rd:60: Lost braces
    60 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:9: Lost braces
     9 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) example_blsm_obj.Rd:10: Lost braces
    10 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:11-15: Lost braces
    11 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:16: Lost braces
    16 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) example_blsm_obj.Rd:17: Lost braces
    17 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) example_blsm_obj.Rd:18: Lost braces
    18 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
NOTE r-devel-linux-x86_64-fedora-gcc

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:58: Lost braces
    58 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) estimate_latent_positions.Rd:59: Lost braces
    59 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) estimate_latent_positions.Rd:60: Lost braces
    60 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:9: Lost braces
     9 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) example_blsm_obj.Rd:10: Lost braces
    10 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:11-15: Lost braces
    11 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:16: Lost braces
    16 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) example_blsm_obj.Rd:17: Lost braces
    17 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) example_blsm_obj.Rd:18: Lost braces
    18 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
NOTE r-devel-macos-arm64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:58: Lost braces
    58 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) estimate_latent_positions.Rd:59: Lost braces
    59 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) estimate_latent_positions.Rd:60: Lost braces
    60 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:9: Lost braces
     9 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) example_blsm_obj.Rd:10: Lost braces
    10 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:11-15: Lost braces
    11 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:16: Lost braces
    16 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) example_blsm_obj.Rd:17: Lost braces
    17 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) example_blsm_obj.Rd:18: Lost braces
    18 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
NOTE r-devel-windows-x86_64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:58: Lost braces
    58 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) estimate_latent_positions.Rd:59: Lost braces
    59 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) estimate_latent_positions.Rd:60: Lost braces
    60 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:9: Lost braces
     9 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) example_blsm_obj.Rd:10: Lost braces
    10 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:11-15: Lost braces
    11 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:16: Lost braces
    16 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) example_blsm_obj.Rd:17: Lost braces
    17 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) example_blsm_obj.Rd:18: Lost braces
    18 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
NOTE r-oldrel-macos-arm64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:58: Lost braces
    58 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) estimate_latent_positions.Rd:59: Lost braces
    59 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) estimate_latent_positions.Rd:60: Lost braces
    60 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:9: Lost braces
     9 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) example_blsm_obj.Rd:10: Lost braces
    10 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:11-15: Lost braces
    11 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:16: Lost braces
    16 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) example_blsm_obj.Rd:17: Lost braces
    17 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) example_blsm_obj.Rd:18: Lost braces
    18 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
NOTE r-oldrel-macos-arm64

installed package size

  installed size is  5.4Mb
  sub-directories of 1Mb or more:
    libs   5.1Mb
NOTE r-oldrel-macos-x86_64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:58: Lost braces
    58 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) estimate_latent_positions.Rd:59: Lost braces
    59 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) estimate_latent_positions.Rd:60: Lost braces
    60 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:9: Lost braces
     9 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) example_blsm_obj.Rd:10: Lost braces
    10 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:11-15: Lost braces
    11 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:16: Lost braces
    16 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) example_blsm_obj.Rd:17: Lost braces
    17 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) example_blsm_obj.Rd:18: Lost braces
    18 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  5.4Mb
  sub-directories of 1Mb or more:
    libs   5.1Mb
NOTE r-oldrel-windows-x86_64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:58: Lost braces
    58 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) estimate_latent_positions.Rd:59: Lost braces
    59 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) estimate_latent_positions.Rd:60: Lost braces
    60 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:9: Lost braces
     9 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) example_blsm_obj.Rd:10: Lost braces
    10 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:11-15: Lost braces
    11 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:16: Lost braces
    16 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) example_blsm_obj.Rd:17: Lost braces
    17 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) example_blsm_obj.Rd:18: Lost braces
    18 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
NOTE r-patched-linux-x86_64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:58: Lost braces
    58 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) estimate_latent_positions.Rd:59: Lost braces
    59 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) estimate_latent_positions.Rd:60: Lost braces
    60 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:9: Lost braces
     9 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) example_blsm_obj.Rd:10: Lost braces
    10 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:11-15: Lost braces
    11 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:16: Lost braces
    16 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) example_blsm_obj.Rd:17: Lost braces
    17 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) example_blsm_obj.Rd:18: Lost braces
    18 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
NOTE r-release-linux-x86_64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:58: Lost braces
    58 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) estimate_latent_positions.Rd:59: Lost braces
    59 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) estimate_latent_positions.Rd:60: Lost braces
    60 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:9: Lost braces
     9 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) example_blsm_obj.Rd:10: Lost braces
    10 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:11-15: Lost braces
    11 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:16: Lost braces
    16 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) example_blsm_obj.Rd:17: Lost braces
    17 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) example_blsm_obj.Rd:18: Lost braces
    18 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
NOTE r-release-macos-arm64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:58: Lost braces
    58 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) estimate_latent_positions.Rd:59: Lost braces
    59 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) estimate_latent_positions.Rd:60: Lost braces
    60 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:9: Lost braces
     9 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) example_blsm_obj.Rd:10: Lost braces
    10 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:11-15: Lost braces
    11 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:16: Lost braces
    16 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) example_blsm_obj.Rd:17: Lost braces
    17 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) example_blsm_obj.Rd:18: Lost braces
    18 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:58: Lost braces
    58 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) estimate_latent_positions.Rd:59: Lost braces
    59 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) estimate_latent_positions.Rd:60: Lost braces
    60 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:9: Lost braces
     9 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) example_blsm_obj.Rd:10: Lost braces
    10 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:11-15: Lost braces
    11 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:16: Lost braces
    16 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) example_blsm_obj.Rd:17: Lost braces
    17 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) example_blsm_obj.Rd:18: Lost braces
    18 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:58: Lost braces
    58 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) estimate_latent_positions.Rd:59: Lost braces
    59 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) estimate_latent_positions.Rd:60: Lost braces
    60 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:9: Lost braces
     9 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) example_blsm_obj.Rd:10: Lost braces
    10 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:11-15: Lost braces
    11 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Latent positions are stored in a
       |                         ^
checkRd: (-1) example_blsm_obj.Rd:16: Lost braces
    16 | \item \code{StartingPositions }{Latent space coordinates right after the initialization step. In the non-Procrustean framework starting distances are given instead.}
       |                                ^
checkRd: (-1) example_blsm_obj.Rd:17: Lost braces
    17 | \item \code{Matrix }{Original matrices of the network (adjacency and BLSM weights)}
       |                     ^
checkRd: (-1) example_blsm_obj.Rd:18: Lost braces
    18 | \item \code{Parameters }{List of parameters specified during the call to \link[BLSM]{estimate_latent_positions}}
       |                         ^

Check History

NOTE 0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-devel-linux-x86_64-debian-clang

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Late
NOTE r-devel-linux-x86_64-debian-gcc

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Late
NOTE r-devel-linux-x86_64-fedora-clang

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Late
NOTE r-devel-linux-x86_64-fedora-gcc

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Late
NOTE r-devel-macos-arm64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Late
NOTE r-devel-windows-x86_64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Late
NOTE r-patched-linux-x86_64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Late
NOTE r-release-linux-x86_64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Late
NOTE r-release-macos-arm64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Late
NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Late
NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Late
NOTE r-oldrel-macos-arm64

installed package size

  installed size is  5.4Mb
  sub-directories of 1Mb or more:
    libs   5.1Mb
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  5.4Mb
  sub-directories of 1Mb or more:
    libs   5.1Mb
NOTE r-oldrel-windows-x86_64

Rd files

checkRd: (-1) estimate_latent_positions.Rd:51: Lost braces
    51 | \item \code{Alpha }{\eqn{\alpha} values from the sampled iterations}
       |                    ^
checkRd: (-1) estimate_latent_positions.Rd:52: Lost braces
    52 | \item \code{Likelihood }{Log-likelihood values from the sampled iterations}
       |                         ^
checkRd: (-1) estimate_latent_positions.Rd:53-57: Lost braces
    53 | \item \code{Iterations }{Latent space coordinates from the sampled iterations. Late

Dependency Network

Dependencies Reverse dependencies Rcpp BLSM

Version History

new 0.1.0 Mar 9, 2026