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TJ

Thibaut Jombart

28 packages 1 year on CRAN 0000-0003-2226-8692

Downloads

96.9K

Last 30 days

170.8K

Last 90 days

170.8K

Last year

Average trend: -4.6% (30d vs prior 30d)

Top Packages by Downloads

ade4
40.1K
adegenet
13K
pegas
8.3K
hierfstat
7.1K
adespatial
6.8K
adephylo
6.6K
apex
2.5K
incidence
1.5K
outbreaks
1.3K
EpiEstim
1.2K

Portfolio Check Status

Aggregate CRAN check results across 5 maintained packages.

14

NOTE

56

OK

Recent Activity

EpiEstim new v2.2-5 Mar 9, 2026

Estimate Time Varying Reproduction Numbers from Epidemic Curves

ade4 new v1.7-23 Mar 9, 2026

Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences

adegenet new v2.1.11 Mar 9, 2026

Exploratory Analysis of Genetic and Genomic Data

adephylo new v1.1-17 Mar 9, 2026

Exploratory Analyses for the Phylogenetic Comparative Method

adespatial new v0.3-28 Mar 9, 2026

Multivariate Multiscale Spatial Analysis

apex new v1.0.7 Mar 9, 2026

Phylogenetic Methods for Multiple Gene Data

cleanepi new v1.1.2 Mar 9, 2026

Clean and Standardize Epidemiological Data

distcrete new v1.0.3 Mar 9, 2026

Discrete Distribution Approximations

earlyR new v0.0.5 Mar 9, 2026

Estimation of Transmissibility in the Early Stages of a Disease Outbreak

epicontacts new v1.1.4 Mar 9, 2026

Handling, Visualisation and Analysis of Epidemiological Contacts

Maintained Packages

5 packages

Package Version
epitrix 0.4.1
projections 0.6.1
trending 0.1.0
earlyR 0.0.5
trendeval 0.1.1

Co-authored Packages

14 packages

Package Version
adegenet 2.1.11
pegas 1.4
hierfstat 0.5-11
adephylo 1.1-17
apex 1.0.7
incidence 1.7.6
outbreaks 1.9.0
distcrete 1.0.3
epicontacts 1.1.4
linelist 2.0.1
outbreaker2 1.1.4
treespace 1.1.4.4
epiflows 0.2.2
reportfactory 0.4.0

Contributions

9 packages

Package Version
ade4 1.7-23
adespatial 0.3-28
EpiEstim 2.2-5
odin 1.2.7
incidence2 2.6.4
matchmaker 0.1.1
finalsize 0.2.1
o2geosocial 1.1.3
cleanepi 1.1.2